Detailed information    

insolico Bioinformatically predicted

Overview

Name   comYG   Type   Machinery gene
Locus tag   AB6M97_RS10165 Genome accession   NZ_CP163514
Coordinates   2066886..2067281 (-) Length   131 a.a.
NCBI ID   WP_121835588.1    Uniprot ID   A0A3L9DWA1
Organism   Streptococcus hillyeri strain S23-3001-1     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2061886..2072281
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB6M97_RS10145 (AB6M97_10145) - 2062325..2063281 (+) 957 WP_121835580.1 S66 peptidase family protein -
  AB6M97_RS10150 (AB6M97_10150) - 2063339..2064529 (-) 1191 WP_121835582.1 acetate kinase -
  AB6M97_RS10155 (AB6M97_10155) - 2064610..2065803 (-) 1194 WP_121835584.1 acetate kinase -
  AB6M97_RS10160 (AB6M97_10160) comYH 2065865..2066806 (-) 942 WP_121835586.1 class I SAM-dependent methyltransferase Machinery gene
  AB6M97_RS10165 (AB6M97_10165) comYG 2066886..2067281 (-) 396 WP_121835588.1 competence type IV pilus minor pilin ComGG Machinery gene
  AB6M97_RS10170 (AB6M97_10170) comYF 2067259..2067714 (-) 456 WP_121835590.1 competence type IV pilus minor pilin ComGF Machinery gene
  AB6M97_RS10175 (AB6M97_10175) comGE 2067680..2067974 (-) 295 Protein_1949 competence type IV pilus minor pilin ComGE -
  AB6M97_RS10180 (AB6M97_10180) comYD 2067946..2068353 (-) 408 WP_121835591.1 competence type IV pilus minor pilin ComGD Machinery gene
  AB6M97_RS10185 (AB6M97_10185) - 2068650..2070065 (-) 1416 WP_121835595.1 peptidoglycan amidohydrolase family protein -
  AB6M97_RS10190 (AB6M97_10190) - 2070194..2070421 (-) 228 WP_121835597.1 phage holin -
  AB6M97_RS10195 (AB6M97_10195) - 2070418..2070723 (-) 306 WP_121835599.1 hypothetical protein -
  AB6M97_RS10200 (AB6M97_10200) - 2070727..2070867 (-) 141 WP_183121663.1 hypothetical protein -
  AB6M97_RS10205 (AB6M97_10205) - 2070899..2071354 (-) 456 WP_121835603.1 DUF1366 domain-containing protein -
  AB6M97_RS10210 (AB6M97_10210) - 2071351..2071536 (-) 186 WP_121835605.1 hypothetical protein -

Sequence

Protein


Download         Length: 131 a.a.        Molecular weight: 14831.89 Da        Isoelectric Point: 9.2373

>NTDB_id=1030378 AB6M97_RS10165 WP_121835588.1 2066886..2067281(-) (comYG) [Streptococcus hillyeri strain S23-3001-1]
MLLKKKVRAGVLLYALLMSAIFALLLQFYLGRVQAAERQNHVQLSAAKAYLIAQLTVDDADEKSGALTFNQGRSTWKRRG
EKLTISVTLPDGYVYQYDFVKTEDERRRKSEESATKDISIEESSASEHKSE

Nucleotide


Download         Length: 396 bp        

>NTDB_id=1030378 AB6M97_RS10165 WP_121835588.1 2066886..2067281(-) (comYG) [Streptococcus hillyeri strain S23-3001-1]
ATGCTTTTGAAAAAGAAAGTTAGGGCAGGGGTACTCCTCTACGCCCTGTTAATGTCAGCTATCTTTGCTCTACTTTTGCA
GTTTTATCTTGGCCGAGTGCAGGCAGCAGAACGCCAGAATCATGTTCAACTATCGGCTGCCAAAGCCTACCTCATCGCTC
AATTGACCGTGGATGATGCTGATGAGAAAAGCGGTGCATTAACCTTTAATCAAGGACGTAGTACCTGGAAGCGTAGAGGA
GAAAAACTGACCATCTCTGTGACACTACCAGACGGCTACGTTTACCAATACGATTTTGTAAAAACAGAAGATGAGAGAAG
GAGAAAATCTGAAGAGAGTGCCACAAAAGATATCTCAATAGAAGAAAGTAGCGCTTCAGAACATAAATCCGAGTGA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3L9DWA1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comYG Streptococcus mutans UA140

55.645

94.656

0.527
  comYG Streptococcus mutans UA159

55.645

94.656

0.527

Multiple sequence alignment