Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   AB6M99_RS04545 Genome accession   NZ_CP163513
Coordinates   957311..958114 (+) Length   267 a.a.
NCBI ID   WP_245962669.1    Uniprot ID   -
Organism   Streptococcus hillyeri strain S23-3001-2     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 952311..963114
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB6M99_RS04530 (AB6M99_04530) - 952682..954430 (+) 1749 WP_369351136.1 ABC transporter ATP-binding protein -
  AB6M99_RS04535 (AB6M99_04535) vicR 955257..955967 (+) 711 WP_369351137.1 response regulator YycF Regulator
  AB6M99_RS04540 (AB6M99_04540) vicK 955960..957330 (+) 1371 WP_121834410.1 cell wall metabolism sensor histidine kinase VicK Regulator
  AB6M99_RS04545 (AB6M99_04545) vicX 957311..958114 (+) 804 WP_245962669.1 MBL fold metallo-hydrolase Regulator
  AB6M99_RS04550 (AB6M99_04550) xseA 958385..959713 (+) 1329 WP_121834411.1 exodeoxyribonuclease VII large subunit -
  AB6M99_RS04555 (AB6M99_04555) - 959706..960185 (+) 480 WP_183121631.1 GNAT family N-acetyltransferase -
  AB6M99_RS04560 (AB6M99_04560) - 960333..960551 (+) 219 WP_121834413.1 exodeoxyribonuclease VII small subunit -
  AB6M99_RS04565 (AB6M99_04565) - 960551..961420 (+) 870 WP_121834414.1 polyprenyl synthetase family protein -
  AB6M99_RS04570 (AB6M99_04570) - 961413..962234 (+) 822 WP_121834415.1 TlyA family RNA methyltransferase -
  AB6M99_RS04575 (AB6M99_04575) - 962356..962802 (+) 447 WP_121834416.1 arginine repressor -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29878.91 Da        Isoelectric Point: 5.9884

>NTDB_id=1030292 AB6M99_RS04545 WP_245962669.1 957311..958114(+) (vicX) [Streptococcus hillyeri strain S23-3001-2]
MMEKGFKYSILASGSSGNSFYLETPKKRILVDAGLSGKKIVSLLDEIDRKPEDLDAILVTHEHKDHIHGVGVLARKYNLD
VYANSKTWQAMDKMLGKLDVSQKHIFETGKVLTFDDIDIESFAVSHDAVAPQFYRFMKDDKSFVMLTDTGYVSDRMSGII
ENADAYLIEANHDIEILRAGSYPWSTKQRILSDYGHLSNEAGAQAMIDSLGNRTQKIYLGHLSKENNIKELAHLTVKNNL
AQADIDVERTVKILDTSPDTATPLTQI

Nucleotide


Download         Length: 804 bp        

>NTDB_id=1030292 AB6M99_RS04545 WP_245962669.1 957311..958114(+) (vicX) [Streptococcus hillyeri strain S23-3001-2]
GTGATGGAAAAGGGGTTTAAGTATAGTATCCTTGCTTCAGGTTCTAGCGGGAATTCCTTTTACTTAGAAACCCCAAAGAA
ACGTATTTTAGTCGATGCTGGTCTCTCTGGTAAGAAAATTGTGAGTTTACTTGATGAAATTGACCGAAAACCAGAGGATT
TAGACGCTATTTTAGTAACACATGAGCATAAAGATCATATCCACGGTGTCGGTGTTTTAGCCCGTAAATATAATTTAGAC
GTTTATGCTAATAGTAAGACTTGGCAGGCCATGGACAAGATGCTAGGTAAACTGGATGTGAGTCAAAAGCATATTTTTGA
GACAGGAAAGGTGCTTACATTTGACGATATAGATATCGAGAGTTTTGCTGTTAGTCACGATGCTGTAGCTCCGCAATTTT
ACCGTTTCATGAAAGATGACAAGAGTTTTGTCATGTTGACAGATACGGGTTATGTTTCCGATCGGATGTCAGGGATTATT
GAAAATGCTGACGCCTATCTCATTGAAGCCAACCATGATATTGAAATATTGAGAGCAGGCTCATATCCTTGGTCAACAAA
GCAGCGCATCTTATCAGATTATGGGCATTTATCAAATGAAGCTGGAGCACAGGCCATGATTGATAGTCTGGGTAACAGAA
CGCAAAAAATTTATCTGGGGCATTTATCTAAAGAAAATAACATCAAAGAATTAGCTCACCTGACTGTTAAAAATAATCTT
GCACAGGCAGATATTGATGTTGAACGTACGGTTAAAATTTTAGATACTTCTCCAGATACTGCAACTCCGTTGACTCAGAT
TTAG

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-211)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.779

100

0.768

Multiple sequence alignment