Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | AB4K06_RS14795 | Genome accession | NZ_CP163458 |
| Coordinates | 2821285..2821620 (+) | Length | 111 a.a. |
| NCBI ID | WP_003226345.1 | Uniprot ID | A0AAE2VGU9 |
| Organism | Bacillus subtilis strain N33 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2816285..2826620
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB4K06_RS14775 (AB4K06_14775) | gcvT | 2816877..2817965 (-) | 1089 | WP_004398598.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| AB4K06_RS14780 (AB4K06_14780) | hepAA | 2818407..2820080 (+) | 1674 | WP_004398544.1 | DEAD/DEAH box helicase | - |
| AB4K06_RS14785 (AB4K06_14785) | yqhG | 2820101..2820895 (+) | 795 | WP_003230200.1 | YqhG family protein | - |
| AB4K06_RS14790 (AB4K06_14790) | sinI | 2821078..2821251 (+) | 174 | WP_003230187.1 | anti-repressor SinI | Regulator |
| AB4K06_RS14795 (AB4K06_14795) | sinR | 2821285..2821620 (+) | 336 | WP_003226345.1 | transcriptional regulator SinR | Regulator |
| AB4K06_RS14800 (AB4K06_14800) | tasA | 2821713..2822498 (-) | 786 | WP_004398632.1 | biofilm matrix protein TasA | - |
| AB4K06_RS14805 (AB4K06_14805) | sipW | 2822562..2823134 (-) | 573 | WP_003246088.1 | signal peptidase I SipW | - |
| AB4K06_RS14810 (AB4K06_14810) | tapA | 2823118..2823879 (-) | 762 | WP_004399106.1 | amyloid fiber anchoring/assembly protein TapA | - |
| AB4K06_RS14815 (AB4K06_14815) | yqzG | 2824151..2824477 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| AB4K06_RS14820 (AB4K06_14820) | spoIITA | 2824519..2824698 (-) | 180 | WP_003230176.1 | YqzE family protein | - |
| AB4K06_RS14825 (AB4K06_14825) | comGG | 2824769..2825143 (-) | 375 | WP_003230170.1 | ComG operon protein ComGG | Machinery gene |
| AB4K06_RS14830 (AB4K06_14830) | comGF | 2825144..2825527 (-) | 384 | WP_003230168.1 | ComG operon protein ComGF | Machinery gene |
| AB4K06_RS14835 (AB4K06_14835) | comGE | 2825553..2825900 (-) | 348 | WP_003230165.1 | ComG operon protein 5 | Machinery gene |
| AB4K06_RS14840 (AB4K06_14840) | comGD | 2825884..2826315 (-) | 432 | WP_004398628.1 | comG operon protein ComGD | Machinery gene |
| AB4K06_RS14845 (AB4K06_14845) | comGC | 2826305..2826601 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12988.64 Da Isoelectric Point: 7.2023
>NTDB_id=1029998 AB4K06_RS14795 WP_003226345.1 2821285..2821620(+) (sinR) [Bacillus subtilis strain N33]
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
Nucleotide
Download Length: 336 bp
>NTDB_id=1029998 AB4K06_RS14795 WP_003226345.1 2821285..2821620(+) (sinR) [Bacillus subtilis strain N33]
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |