Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   AB4X21_RS10075 Genome accession   NZ_CP163380
Coordinates   2050922..2051683 (+) Length   253 a.a.
NCBI ID   WP_369087942.1    Uniprot ID   -
Organism   Streptococcus sp. CP1998     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2045922..2056683
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB4X21_RS10050 (AB4X21_10050) comE/comE2 2046427..2047185 (-) 759 WP_151379380.1 LytTR family DNA-binding domain-containing protein Regulator
  AB4X21_RS10055 (AB4X21_10055) - 2047182..2048522 (-) 1341 WP_270300096.1 GHKL domain-containing protein -
  AB4X21_RS10065 (AB4X21_10065) rlmH 2048985..2049464 (-) 480 WP_369087941.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  AB4X21_RS10070 (AB4X21_10070) htrA 2049669..2050850 (+) 1182 WP_151379379.1 S1C family serine protease Regulator
  AB4X21_RS10075 (AB4X21_10075) spo0J 2050922..2051683 (+) 762 WP_369087942.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 253 a.a.        Molecular weight: 29415.01 Da        Isoelectric Point: 9.7134

>NTDB_id=1029453 AB4X21_RS10075 WP_369087942.1 2050922..2051683(+) (spo0J) [Streptococcus sp. CP1998]
MEKLEKIAVKDIRTNPFQPRKVFDQEKLEELAQSIKENGLIQPIIVRKSPIIGFELLAGERRFRASKIAGLELVPAIIKE
LTDQEMMRQAIIENLQREDLNPIEEAISYQKLVDHGYKHDQIAQFMGKSRPYISNMLRLLHLAPSVQEAVIQNDISSAHA
RVLIPLDEEEQRFWLERIKQDHLNVRTLENKISSKRKQKNKKIKESFLLEEEQRLKKILGTEVTIHSSSQNKGTIQISFS
SLDEYQRIINSLK

Nucleotide


Download         Length: 762 bp        

>NTDB_id=1029453 AB4X21_RS10075 WP_369087942.1 2050922..2051683(+) (spo0J) [Streptococcus sp. CP1998]
ATGGAAAAATTAGAAAAGATAGCAGTAAAGGACATTCGAACCAATCCTTTCCAACCAAGAAAAGTATTTGATCAAGAAAA
ATTAGAAGAACTGGCTCAGTCAATCAAAGAAAATGGCTTAATTCAACCCATTATTGTCAGAAAATCTCCAATAATTGGTT
TTGAATTGCTTGCAGGTGAAAGACGGTTTAGAGCTTCAAAAATTGCTGGATTAGAGCTTGTTCCTGCGATTATTAAAGAG
TTAACGGATCAAGAAATGATGCGACAAGCCATTATTGAAAATCTTCAACGAGAAGATCTAAATCCAATTGAAGAAGCTAT
CTCCTACCAGAAGCTAGTTGATCATGGATATAAGCACGACCAAATCGCTCAATTTATGGGGAAATCTAGACCCTATATTA
GCAATATGCTTCGCTTGTTACATCTAGCTCCCTCTGTTCAAGAAGCGGTCATTCAAAATGACATTTCTTCGGCTCACGCG
CGTGTTCTCATTCCTCTTGATGAAGAAGAGCAGCGCTTTTGGTTGGAGCGAATCAAACAGGATCATTTAAATGTTCGAAC
ATTAGAAAACAAGATCAGTTCAAAAAGAAAACAGAAAAATAAAAAAATAAAAGAAAGTTTCCTACTAGAAGAGGAACAAC
GATTGAAAAAAATATTGGGAACAGAAGTGACGATACACTCCTCTTCGCAAAATAAAGGAACTATCCAAATTTCTTTTTCA
AGTCTCGATGAATACCAACGAATTATCAACAGCCTAAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

49.012

100

0.49


Multiple sequence alignment