Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   AB4X21_RS07470 Genome accession   NZ_CP163380
Coordinates   1464278..1465282 (-) Length   334 a.a.
NCBI ID   WP_369087745.1    Uniprot ID   A0AB39LA04
Organism   Streptococcus sp. CP1998     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1459278..1470282
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB4X21_RS07455 (AB4X21_07455) thrS 1459517..1461460 (-) 1944 WP_320910524.1 threonine--tRNA ligase -
  AB4X21_RS07460 (AB4X21_07460) - 1461814..1463136 (-) 1323 WP_125826745.1 glycosyltransferase family 4 protein -
  AB4X21_RS07465 (AB4X21_07465) - 1463138..1464136 (-) 999 WP_320910523.1 glycosyltransferase -
  AB4X21_RS07470 (AB4X21_07470) ccpA 1464278..1465282 (-) 1005 WP_369087745.1 catabolite control protein A Regulator
  AB4X21_RS07475 (AB4X21_07475) - 1465443..1466525 (+) 1083 WP_155172265.1 Xaa-Pro peptidase family protein -
  AB4X21_RS07480 (AB4X21_07480) - 1466547..1466885 (+) 339 WP_155172268.1 hypothetical protein -
  AB4X21_RS07485 (AB4X21_07485) - 1467012..1467455 (-) 444 WP_155172271.1 Rrf2 family transcriptional regulator -
  AB4X21_RS07490 (AB4X21_07490) - 1467567..1468409 (-) 843 WP_155172273.1 metallophosphoesterase -

Sequence

Protein


Download         Length: 334 a.a.        Molecular weight: 37151.30 Da        Isoelectric Point: 6.9973

>NTDB_id=1029441 AB4X21_RS07470 WP_369087745.1 1464278..1465282(-) (ccpA) [Streptococcus sp. CP1998]
MNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIERLDYRPNAVARGLASKKTTTVGVVIPNITNSYFS
TLAKGIDDIAEMYKYNIVLANSDEDDDKEVSVVNNLFSKQVDGIIFMGYHLTEKIRSEFSRSRTPVVLAGTVDVEHQLPS
VNIDYKQATVDAVTQLAKHNKKIAFVSGPLVDDINGKIRLTGYKEALKAKKLSYSEGLVFESKYRYDEGYNLAERIIASK
ATVAFVTGDELVAGLLNGLSDKGIKVPEDFEIITSDDSQVTRYTRPNLSTIGQPLYDLGAISMRMLTKIMHKEELEEREV
LLSHTINQRGTTKK

Nucleotide


Download         Length: 1005 bp        

>NTDB_id=1029441 AB4X21_RS07470 WP_369087745.1 1464278..1465282(-) (ccpA) [Streptococcus sp. CP1998]
ATGAATACAGACGATACAGTAACGATTTATGATGTCGCCCGTGAAGCAGGGGTTTCAATGGCAACCGTTAGTCGTGTAGT
GAATGGAAATAAGAACGTTAAAGAAAATACACGTAAAAAAGTATTAGAAGTGATCGAACGCTTGGATTACCGTCCAAATG
CTGTTGCGCGTGGTCTTGCCAGCAAGAAAACCACAACAGTCGGTGTTGTTATTCCAAACATCACGAACAGCTATTTCTCT
ACATTGGCTAAGGGGATCGATGACATTGCTGAAATGTACAAGTACAATATTGTTCTTGCAAATAGCGATGAAGACGATGA
CAAAGAAGTTTCAGTGGTAAACAACCTTTTTTCAAAACAAGTGGATGGCATCATTTTCATGGGCTATCATTTGACAGAAA
AGATTCGCTCAGAATTTTCACGCTCTCGTACGCCGGTTGTCCTTGCTGGGACAGTGGATGTTGAACACCAATTACCAAGT
GTCAATATTGACTACAAGCAAGCAACCGTTGATGCTGTTACACAGTTGGCAAAACACAACAAGAAAATTGCTTTTGTAAG
CGGCCCATTGGTGGATGATATTAATGGAAAAATTCGTTTGACAGGCTACAAAGAAGCTTTGAAAGCGAAAAAATTGAGCT
ATAGCGAAGGACTTGTGTTTGAATCCAAGTACCGTTACGATGAAGGATATAACTTGGCAGAACGCATCATTGCATCGAAA
GCAACAGTCGCCTTTGTAACAGGTGATGAATTGGTTGCAGGTCTCTTGAACGGTTTGTCTGATAAAGGGATCAAGGTACC
AGAAGACTTTGAAATTATCACCAGCGATGATTCACAAGTAACTCGTTACACGCGTCCAAATCTATCAACGATTGGCCAAC
CTTTGTATGACCTTGGTGCAATCAGTATGCGTATGTTGACCAAGATCATGCACAAAGAAGAGTTGGAAGAACGCGAGGTA
CTGTTGTCTCATACGATCAACCAACGTGGAACGACCAAAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, lacI family (LacI)

(8-53)

Periplasmic binding protein-like domain (Peripla_BP_3)

(180-332)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

90.419

100

0.904
  ccpA Streptococcus pneumoniae D39

84.731

100

0.847
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

56.495

99.102

0.56

Multiple sequence alignment