Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   AB4X21_RS07435 Genome accession   NZ_CP163380
Coordinates   1454891..1455700 (-) Length   269 a.a.
NCBI ID   WP_369087744.1    Uniprot ID   -
Organism   Streptococcus sp. CP1998     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1449891..1460700
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB4X21_RS07420 (AB4X21_07420) rnc 1452637..1453338 (-) 702 WP_320910529.1 ribonuclease III -
  AB4X21_RS07425 (AB4X21_07425) - 1453672..1454133 (+) 462 WP_320910528.1 hypothetical protein -
  AB4X21_RS07430 (AB4X21_07430) - 1454385..1454771 (-) 387 WP_320910527.1 YbaN family protein -
  AB4X21_RS07435 (AB4X21_07435) vicX 1454891..1455700 (-) 810 WP_369087744.1 MBL fold metallo-hydrolase Regulator
  AB4X21_RS07440 (AB4X21_07440) micB 1455708..1457060 (-) 1353 WP_003005638.1 cell wall metabolism sensor histidine kinase VicK Regulator
  AB4X21_RS07445 (AB4X21_07445) micA 1457053..1457754 (-) 702 WP_003005102.1 response regulator YycF Regulator
  AB4X21_RS07450 (AB4X21_07450) - 1458256..1459305 (+) 1050 WP_320910525.1 DUF389 domain-containing protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 29784.77 Da        Isoelectric Point: 5.9511

>NTDB_id=1029438 AB4X21_RS07435 WP_369087744.1 1454891..1455700(-) (vicX) [Streptococcus sp. CP1998]
MTEEGFKYSILASGSSGNSFYLETPKKKLLIDAGLSGKKITGLLAEIDRKPEDLDAILITHEHSDHIHGVGVLARKYGMD
LYANEATWKAMEGTKYLGKVDDAQKHIFEMGKTKTFGDIDIESFGVSHDAVAPQFYRFMKDGKSFVMLTDTGYVSDRLAG
IVADADGYLIESNHDVEILRAGSYAWRLKQRILSDLGHLSNEDGADAMIRTLGNRTKKIYLGHLSKENNIKELAHMTMEN
QLARADLAVGHDFEVLDTSPDTATPLTKI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=1029438 AB4X21_RS07435 WP_369087744.1 1454891..1455700(-) (vicX) [Streptococcus sp. CP1998]
ATGACAGAAGAGGGATTTAAGTATAGTATTTTAGCTTCAGGTTCTAGTGGGAATTCTTTCTACCTTGAGACGCCAAAGAA
AAAACTGCTTATTGATGCAGGGCTATCAGGGAAAAAGATTACGGGACTATTGGCTGAAATTGATCGCAAACCAGAAGACT
TAGATGCCATTTTGATTACGCACGAACACTCAGACCATATCCATGGTGTGGGTGTTTTAGCGCGGAAATACGGCATGGAT
CTATATGCTAATGAAGCAACTTGGAAGGCTATGGAAGGCACCAAGTATCTAGGAAAGGTCGATGATGCTCAAAAGCACAT
TTTTGAAATGGGGAAGACCAAGACATTTGGCGATATCGATATTGAAAGTTTTGGGGTCAGTCACGATGCTGTTGCCCCTC
AATTCTATCGCTTTATGAAGGATGGAAAGAGCTTCGTCATGCTGACGGATACGGGCTATGTGAGTGATCGCTTGGCAGGC
ATCGTCGCGGATGCTGATGGCTATCTGATTGAGTCCAACCATGATGTAGAGATCCTTCGAGCAGGTTCTTATGCTTGGCG
CTTGAAGCAGCGGATCTTGTCAGACCTAGGCCACCTTTCTAACGAAGATGGTGCCGATGCCATGATCCGAACCTTGGGAA
ATCGCACCAAGAAGATTTATCTGGGGCATTTGTCAAAAGAGAACAATATTAAAGAATTGGCTCATATGACCATGGAGAAT
CAACTGGCTCGAGCAGATCTAGCTGTCGGCCATGATTTTGAGGTGTTAGATACCTCGCCAGATACCGCGACCCCTTTGAC
GAAGATATAA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

77.695

100

0.777

Multiple sequence alignment