Detailed information NTG1029414

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: AB4X21_RS02595
• Genome accession: NZ_CP163380
• Coordinates: 487195..488118 (+)
• Length: 307 a.a.
• NCBI ID: WP_369088139.1
• Uniprot ID: A0AB39LD52
• Organism: Streptococcus sp. CP1998
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 482195..493118

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB4X21_RS02580 (AB4X21_02580)	amiC	483680..485179 (+)	1500	WP_070595566.1	ABC transporter permease	Regulator
AB4X21_RS02585 (AB4X21_02585)	amiD	485179..486105 (+)	927	WP_003010290.1	oligopeptide ABC transporter permease OppC	Regulator
AB4X21_RS02590 (AB4X21_02590)	amiE	486117..487184 (+)	1068	WP_003010293.1	ABC transporter ATP-binding protein	Regulator
AB4X21_RS02595 (AB4X21_02595)	amiF	487195..488118 (+)	924	WP_369088139.1	ATP-binding cassette domain-containing protein	Regulator

Sequence

Protein

• Length: 307 a.a.
• Molecular weight: 34855.96 Da
• Isoelectric Point: 6.2493

>NTDB_id=1029414 AB4X21_RS02595 WP_369088139.1 487195..488118(+) (amiF) [Streptococcus sp. CP1998]
MTEKLVEIKDLEISFGEGSKKFVAVKNANFFINKGETFSLVGESGSGKTTIGRAIIGLNDTSAGDILYDGKKINGKQSRK
DENELIRKIQMIFQDPAASLNERATVDYIISEGLYNYHLFENEEDRVRKVKEIMHEVGLLAEHLTRYPHEFSGGQRQRIG
IARALVMEPEFVIADEPISALDVSVRAQVLNLLKKFQKELGLTYLFIAHDLSVVRFISDRIAVIHKGVIVEVAETEELFN
NPIHPYTQSLLSSVPIPDPILERKKVLKVYEPDQHDYSTDKPEMVEIKPGHYVWANKAEQKKYKELV

Nucleotide

• Length: 924 bp

>NTDB_id=1029414 AB4X21_RS02595 WP_369088139.1 487195..488118(+) (amiF) [Streptococcus sp. CP1998]
ATGACTGAAAAATTAGTTGAAATTAAAGATTTAGAAATTTCCTTCGGTGAAGGAAGTAAAAAATTTGTAGCTGTAAAGAA
TGCAAATTTCTTCATCAACAAAGGGGAAACATTTTCTCTTGTTGGTGAGTCTGGTAGTGGGAAGACGACAATTGGTCGTG
CAATCATTGGTTTGAATGACACTAGTGCAGGTGATATCCTGTATGATGGCAAAAAGATCAATGGGAAGCAATCGCGCAAG
GATGAAAATGAATTAATCCGTAAAATTCAAATGATCTTCCAAGACCCAGCGGCAAGTTTGAACGAGCGTGCAACAGTCGA
CTACATTATTTCAGAAGGTTTGTACAATTATCACCTATTCGAAAATGAAGAAGACCGAGTACGTAAAGTAAAAGAGATTA
TGCATGAAGTGGGGCTTCTAGCAGAGCATTTAACTCGTTATCCTCATGAATTCTCTGGTGGACAACGCCAGCGGATTGGG
ATTGCTCGTGCCTTGGTAATGGAGCCAGAATTTGTTATCGCAGACGAGCCTATTTCAGCCCTTGACGTATCCGTACGTGC
GCAAGTTTTAAATCTCCTTAAGAAATTCCAAAAAGAGTTGGGCTTGACCTATCTCTTTATCGCGCACGATCTTTCAGTAG
TTCGTTTTATCTCTGATCGTATTGCGGTTATTCACAAAGGAGTTATTGTAGAAGTAGCTGAAACGGAAGAATTGTTTAAT
AATCCGATTCATCCTTATACACAATCTCTCCTGTCTTCTGTTCCGATTCCAGATCCAATTCTAGAACGCAAAAAAGTTCT
GAAAGTTTATGAACCTGATCAGCATGATTATTCAACAGACAAACCAGAAATGGTTGAAATCAAGCCAGGACATTACGTTT
GGGCAAATAAAGCAGAACAGAAAAAATATAAAGAACTTGTATAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (230-271)

• ABC transporter (ABC_tran) (25-178)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus salivarius strain HSISS4	83.607	99.349	0.831
amiF	Streptococcus thermophilus LMG 18311	83.279	99.349	0.827
amiF	Streptococcus thermophilus LMD-9	82.951	99.349	0.824