Detailed information NTG1028896

Bioinformatically predicted

Overview

• Name: ciaH
• Type: Regulator
• Locus tag: LLA12_RS08795
• Genome accession: NZ_LT599049
• Coordinates: 1839660..1841027 (-)
• Length: 455 a.a.
• NCBI ID: WP_021722128.1
• Uniprot ID: -
• Organism: Lactococcus lactis subsp. lactis strain A12
• Function: Required for optimal comC expression (predicted from homology) Competence regulation

Genomic Context

Location: 1834660..1846027

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LLA12_RS08780 (LLA12_01877)	-	1835830..1837263 (-)	1434	WP_021722126.1	6-phospho-beta-glucosidase	-
LLA12_RS08785 (LLA12_01878)	yidD	1837387..1837653 (-)	267	WP_012898265.1	membrane protein insertion efficiency factor YidD	-
LLA12_RS08790 (LLA12_01879)	-	1837770..1839512 (-)	1743	WP_021722127.1	1-deoxy-D-xylulose-5-phosphate synthase	-
LLA12_RS08795 (LLA12_01880)	ciaH	1839660..1841027 (-)	1368	WP_021722128.1	sensor histidine kinase	Regulator
LLA12_RS08800 (LLA12_01881)	ciaR	1841121..1841789 (-)	669	WP_021722129.1	response regulator transcription factor	Regulator
LLA12_RS08805 (LLA12_01882)	-	1841967..1842941 (-)	975	WP_021722130.1	LacI family DNA-binding transcriptional regulator	-
LLA12_RS08810 (LLA12_01883)	-	1843094..1845349 (-)	2256	WP_003130366.1	glycoside hydrolase family 65 protein	-

Sequence

Protein

• Length: 455 a.a.
• Molecular weight: 51242.83 Da
• Isoelectric Point: 9.4771

>NTDB_id=1028896 LLA12_RS08795 WP_021722128.1 1839660..1841027(-) (ciaH) [Lactococcus lactis subsp. lactis strain A12]
MKKIIKKIKSSAIVKNDGKNFLHFFLAFTVIFVALAVIIIQVMQLGMYRATDQNLHNLAQNRVFLEEAANNQLGTSSSQD
SGFGPNNSVIFYDSEGKNFMPSTGSNANISTNFGMSLLQKAMKFNEKHINTIQTVSVKNPYGDNLHYRYYTTSQFIITNS
DGTVTPVYMQIFSNVDQIQDAMSRAMWVIVTTMITFWLLSIIISLYLANWTLRPILAAYEKQKEFVENASHELRTPLAIL
QNRLELLFQKPTATIIDESENISESLSEVRNMRLLTSNLLNLARRDSGIRIEPEATTATYFENIFNSYEMLAENAGKKFS
GHLKLDGTINLDQALIKQLLTILFDNALKYTGDEGEISVDVQKNGVFLVFAVADNGEGISDEDKKKIFDRFFRVDKARTR
QKGGLGLGLSLAKQIVEAYNGKITVEDNKPKGTKFIVRIRVDSTISNPAKIFQKL

Nucleotide

• Length: 1368 bp

>NTDB_id=1028896 LLA12_RS08795 WP_021722128.1 1839660..1841027(-) (ciaH) [Lactococcus lactis subsp. lactis strain A12]
TTGAAGAAAATAATTAAAAAAATTAAATCTTCAGCTATTGTAAAAAATGATGGGAAAAATTTCCTTCATTTTTTTCTAGC
TTTTACAGTCATTTTTGTTGCTTTAGCCGTGATTATTATTCAAGTCATGCAATTAGGAATGTATCGAGCGACTGACCAAA
ATTTACACAATTTGGCTCAAAACCGAGTGTTTTTGGAAGAAGCAGCGAATAATCAATTAGGAACAAGTAGTTCACAAGAC
AGTGGCTTTGGACCTAATAATAGTGTAATTTTTTATGATTCAGAAGGAAAAAACTTTATGCCGTCAACGGGCTCAAATGC
AAATATAAGTACAAACTTTGGCATGAGTCTTTTGCAAAAAGCAATGAAATTTAATGAAAAACATATAAATACAATTCAGA
CAGTATCTGTAAAAAATCCTTATGGAGATAATTTGCACTATCGTTATTACACAACATCGCAATTTATCATTACAAATTCT
GATGGTACTGTGACGCCAGTTTATATGCAAATTTTTTCAAACGTTGACCAAATTCAAGATGCCATGAGTCGTGCCATGTG
GGTCATTGTGACAACAATGATTACTTTCTGGCTACTATCAATAATTATTAGTTTGTATCTTGCAAATTGGACATTAAGAC
CTATTCTGGCCGCTTATGAAAAACAAAAAGAATTTGTTGAAAATGCTTCACATGAATTGAGAACACCTCTGGCAATCTTG
CAAAATCGTCTAGAATTACTTTTCCAAAAGCCAACAGCAACAATTATTGATGAATCAGAAAATATTTCTGAAAGTTTATC
AGAAGTTCGTAATATGCGTTTATTAACAAGTAACTTACTGAACTTAGCTCGTCGAGATTCTGGAATCAGAATTGAGCCAG
AGGCGACTACGGCAACTTATTTTGAGAATATTTTTAATAGCTATGAAATGCTTGCTGAAAACGCAGGTAAAAAGTTTTCA
GGCCATTTGAAATTAGATGGAACGATTAATTTGGACCAAGCCCTGATTAAACAATTGCTAACCATCTTATTTGATAATGC
TCTTAAATACACGGGTGATGAGGGTGAAATCTCTGTAGATGTTCAAAAAAATGGGGTATTCTTAGTTTTTGCTGTCGCCG
ATAATGGTGAAGGAATTTCTGATGAAGATAAGAAAAAAATATTTGACCGCTTTTTCCGAGTAGATAAAGCAAGAACGCGT
CAAAAAGGTGGCTTAGGTTTGGGTCTTTCTCTGGCCAAACAAATTGTTGAAGCTTACAATGGGAAGATTACAGTTGAAGA
TAATAAACCTAAAGGTACAAAATTCATTGTTAGAATTCGTGTGGACAGCACAATTTCAAATCCTGCAAAAATTTTCCAAA
AGTTGTAA

Domains

Predicted by InterProScan.

• His Kinase A (phospho-acceptor) domain (HisKA) (222-288)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (332-441)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ciaH	Streptococcus mutans UA159	48.372	94.505	0.457
ciaH	Streptococcus pneumoniae Rx1	44.444	98.901	0.44
ciaH	Streptococcus pneumoniae D39	44.444	98.901	0.44
ciaH	Streptococcus pneumoniae R6	44.444	98.901	0.44
ciaH	Streptococcus pneumoniae TIGR4	44.444	98.901	0.44