Detailed information NTG1027760

Bioinformatically predicted

Overview

• Name: comA/comEC
• Type: Machinery gene
• Locus tag: AB4073_RS05565
• Genome accession: NZ_CP162643
• Coordinates: 1167443..1169875 (+)
• Length: 810 a.a.
• NCBI ID: WP_216967925.1
• Uniprot ID: -
• Organism: Acinetobacter lactucae strain 128-92
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Prophage	1166673..1174558	1167443..1169875	within	0

Gene organization within MGE regions

Location: 1166673..1174558

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB4073_RS05560 (AB4073_05560)	lolD	1166673..1167359 (+)	687	WP_216967924.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
AB4073_RS05565 (AB4073_05565)	comA/comEC	1167443..1169875 (+)	2433	WP_216967925.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
AB4073_RS05570 (AB4073_05570)	-	1169828..1170811 (-)	984	WP_216967926.1	lysophospholipid acyltransferase family protein	-
AB4073_RS05575 (AB4073_05575)	sppA	1170945..1171961 (+)	1017	WP_016146163.1	signal peptide peptidase SppA	-
AB4073_RS05580 (AB4073_05580)	-	1171985..1172794 (+)	810	WP_061875432.1	alpha/beta fold hydrolase	-
AB4073_RS05585 (AB4073_05585)	purN	1172862..1173491 (-)	630	WP_368678567.1	phosphoribosylglycinamide formyltransferase	-
AB4073_RS05590 (AB4073_05590)	purM	1173488..1174558 (-)	1071	WP_216967928.1	phosphoribosylformylglycinamidine cyclo-ligase	-

Sequence

Protein

• Length: 810 a.a.
• Molecular weight: 92657.26 Da
• Isoelectric Point: 9.2322

>NTDB_id=1027760 AB4073_RS05565 WP_216967925.1 1167443..1169875(+) (comA/comEC) [Acinetobacter lactucae strain 128-92]
MLKFILMGWIGGIAFMGIDIPLIMQYGWIGKVLIVIGFIFYIFKGYTFLNRPILKAIYCLVCAISLFIIGHQYAQHALNK
RLQLRQMQPKSLDIVVYVDRISEEKEDKTQQPVQVLGQSLHPVTWLLYLKNQKVNSAIDEPILQLGHYYRISGKTRPAHS
YAVAGAFDQEQWFIQRNIMSGFSVQHIEPLSSDEIYRLGYQHHLKDQQKFFNRQKLNIEKLRLKFRLMLKQSPLQNKGLL
LALLTGDESLLNDEIKNQFKELGISHLLAISGPHVLIFAIMLSWGLHQLVRRYYPQLYLHQPKQIWAMIPLCFGVLIYTA
FVGFEIPALRTLLSVVLFASLLLIKLPVRPFSLLVYSASLLLFFDPFSVLSAGFWLSYGSCFILLRIYQTIEQVPNLVST
SLLSRIILFSKILIESQGKIFIALCPLMLIFFQQISWVAPFTNIIAVPLLGGVIVPLNIFAACVWLIFNSFGNLLFQINN
VLISIVLTCFDLLEKLSLPLQGFSLTPLDLVCLSFVIIILFLPRGVLPKSWGLICCLPLVIPNKSSQQIQINIIDVGQGQ
AIFLQHPQQTWLIDTGGSYDEKAFSIGQNVVIPYLRQKGIKQLDHVILSHLDQDHSGAFPSIAQAFPIKQVISNELWTEQ
IKEPFTYCHQGQKWQYPQLDIEILWPMEKDLNLVSSNQNQYSCVVYIHLKQVTGYQNYLIMGDAGWEAEYQLMKEYPDLK
VDVLVLGHHGSKHSSAYDFLATLKPKLVIASAGFNNRYGHPSKEVLARVQALHIPFKSTVGQGTLSFVSRNHEMVLYTRR
FERTWLHRHL

Nucleotide

• Length: 2433 bp

>NTDB_id=1027760 AB4073_RS05565 WP_216967925.1 1167443..1169875(+) (comA/comEC) [Acinetobacter lactucae strain 128-92]
ATGTTAAAATTTATTTTAATGGGGTGGATTGGGGGTATTGCATTTATGGGGATAGATATCCCTCTCATCATGCAATATGG
TTGGATCGGTAAAGTATTAATCGTTATAGGTTTTATTTTTTATATTTTTAAGGGGTATACATTTTTAAATCGGCCCATAT
TAAAAGCCATTTACTGTCTAGTCTGCGCTATTAGTCTTTTTATTATAGGACATCAATATGCTCAGCATGCTTTAAATAAA
AGATTACAACTGCGACAAATGCAGCCTAAATCTTTAGATATAGTTGTGTATGTAGACCGCATAAGTGAAGAAAAAGAAGA
TAAGACACAGCAACCCGTTCAGGTACTAGGGCAGTCCTTACATCCCGTCACTTGGCTATTATATTTAAAAAATCAGAAAG
TAAACTCAGCCATAGATGAGCCAATATTACAATTAGGTCATTACTATCGAATTTCGGGTAAAACCAGACCAGCTCATAGT
TATGCAGTGGCAGGAGCTTTTGATCAAGAACAATGGTTTATTCAGCGAAATATAATGTCTGGTTTTAGTGTTCAGCATAT
TGAGCCTTTAAGCTCTGATGAAATTTATCGGTTGGGTTATCAACATCATTTAAAAGATCAACAAAAGTTTTTTAACCGAC
AAAAATTAAATATAGAAAAATTGCGTCTAAAATTTAGATTAATGCTGAAACAATCTCCTTTGCAGAATAAGGGACTATTA
TTAGCTTTATTAACAGGGGATGAAAGTCTCTTAAATGATGAGATTAAAAATCAATTTAAGGAATTAGGAATCTCTCATTT
ATTGGCGATTTCAGGGCCTCATGTGCTCATTTTTGCCATCATGTTGTCTTGGGGATTACATCAATTAGTACGACGTTATT
ATCCGCAGCTTTATTTGCATCAACCTAAACAAATTTGGGCCATGATTCCATTATGTTTCGGTGTTTTGATTTATACCGCA
TTTGTTGGTTTTGAAATTCCCGCCTTAAGAACTTTACTTTCAGTAGTTTTATTTGCTTCTTTATTATTGATTAAACTGCC
TGTTAGGCCATTTTCACTGTTAGTTTACAGTGCAAGTCTACTTTTATTTTTCGATCCTTTCAGTGTTTTATCTGCAGGCT
TTTGGCTCTCTTATGGTTCCTGCTTTATTTTATTACGGATTTATCAAACTATTGAACAGGTTCCAAATCTTGTTTCAACG
AGTCTGTTATCTAGAATCATTCTTTTCAGTAAAATTTTAATTGAATCTCAAGGCAAAATATTTATTGCCTTATGTCCCTT
AATGTTGATTTTCTTTCAACAGATTTCATGGGTTGCTCCTTTTACAAATATTATTGCTGTTCCTTTACTCGGAGGAGTGA
TTGTTCCTTTAAACATTTTTGCAGCTTGTGTATGGCTTATTTTTAACTCATTCGGAAATTTACTTTTTCAAATTAATAAT
GTCCTGATTAGTATAGTACTGACATGTTTTGATCTTTTAGAAAAGCTATCATTACCATTACAAGGCTTTAGCCTGACACC
ACTTGATTTAGTTTGCCTTAGCTTCGTTATTATTATCTTATTTTTACCGCGTGGGGTTTTACCAAAATCTTGGGGGCTCA
TATGCTGTTTACCCTTGGTTATTCCGAATAAGTCGTCCCAGCAAATTCAAATCAATATTATAGATGTAGGACAGGGACAA
GCTATTTTCCTGCAGCACCCGCAGCAGACATGGCTAATCGATACGGGTGGGTCTTATGATGAAAAGGCTTTTAGTATTGG
TCAAAATGTGGTGATCCCATATTTACGTCAAAAAGGAATTAAACAATTAGATCACGTCATACTATCTCATCTTGACCAAG
ACCATAGCGGAGCATTTCCTTCTATCGCACAGGCTTTTCCTATTAAACAAGTTATATCAAATGAATTATGGACAGAACAA
ATTAAAGAACCATTTACTTATTGTCATCAAGGGCAAAAATGGCAATATCCACAATTAGATATTGAAATCCTTTGGCCTAT
GGAAAAGGATTTAAATTTAGTTTCTTCAAATCAAAATCAATATTCTTGTGTGGTTTATATTCACTTGAAACAGGTAACAG
GTTATCAAAATTATCTAATTATGGGTGATGCGGGGTGGGAAGCAGAATATCAACTCATGAAAGAATATCCAGATTTAAAG
GTAGACGTTTTGGTATTAGGTCATCATGGGAGTAAGCATAGTTCGGCTTATGATTTTTTAGCCACATTAAAGCCAAAGCT
TGTGATTGCCTCGGCTGGCTTTAATAATCGATATGGGCACCCAAGCAAAGAGGTTTTGGCGAGAGTACAAGCGCTTCATA
TTCCGTTTAAAAGCACAGTTGGGCAAGGAACATTAAGTTTTGTATCTCGCAATCATGAGATGGTTTTATACACTCGACGT
TTCGAGCGTACTTGGCTTCACAGGCATTTGTGA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (243-522)

• Metallo-beta-lactamase superfamily (Lactamase_B) (555-643)

• Domain of unknown function (DUF4131) (DUF4131) (29-188)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA/comEC	Acinetobacter baumannii D1279779	70.297	99.753	0.701
comA/comEC	Acinetobacter baumannii strain A118	69.554	99.753	0.694
comA/comEC	Acinetobacter baylyi ADP1	49.02	100	0.494