Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   AB4073_RS04440 Genome accession   NZ_CP162643
Coordinates   908905..909288 (+) Length   127 a.a.
NCBI ID   WP_000389061.1    Uniprot ID   -
Organism   Acinetobacter lactucae strain 128-92     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 903905..914288
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB4073_RS04430 (AB4073_04430) - 906804..907913 (-) 1110 WP_368678819.1 efflux RND transporter periplasmic adaptor subunit -
  AB4073_RS04435 (AB4073_04435) - 907982..908620 (-) 639 WP_368678502.1 hypothetical protein -
  AB4073_RS04440 (AB4073_04440) pilG 908905..909288 (+) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  AB4073_RS04445 (AB4073_04445) - 909312..909674 (+) 363 WP_002116220.1 PleD family two-component system response regulator -
  AB4073_RS04450 (AB4073_04450) - 909735..910271 (+) 537 WP_002116439.1 chemotaxis protein CheW -
  AB4073_RS04455 (AB4073_04455) - 910314..912392 (+) 2079 WP_061874138.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14200.23 Da        Isoelectric Point: 4.5762

>NTDB_id=1027758 AB4073_RS04440 WP_000389061.1 908905..909288(+) (pilG) [Acinetobacter lactucae strain 128-92]
MEDAFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSS

Nucleotide


Download         Length: 384 bp        

>NTDB_id=1027758 AB4073_RS04440 WP_000389061.1 908905..909288(+) (pilG) [Acinetobacter lactucae strain 128-92]
ATGGAAGATGCATTCCAAAATCTGAAAGTAATGGTGATTGATGACTCAAAAACCATTCGCCGTACAGCAGAAACTTTATT
GCAGCGCGAAGGCTGTGAAGTCATTACTGCTGTGGATGGATTTGAAGCTTTGTCCAAAATTGCAGAAGCAAATCCGGATA
TTGTTTTTGTCGATATCATGATGCCTCGTTTAGATGGTTATCAAACTTGTGCTTTGATAAAAAACTCTCAAAATTATCAG
AACATTCCCGTTATCATGCTCTCTAGTAAAGATGGTTTATTTGATCAGGCAAAAGGGCGTGTGGTAGGTTCAGATGAATA
CTTGACGAAACCTTTTAGCAAAGATGAATTGTTAAACGCGATTCGTAATCATGTAAGTTCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

100

100

1
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37

Multiple sequence alignment