Detailed information NTG1027220

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: AB4P95_RS26715
• Genome accession: NZ_CP162583
• Coordinates: 5774285..5775631 (-)
• Length: 448 a.a.
• NCBI ID: WP_042561132.1
• Uniprot ID: A0A9X4H9K0
• Organism: Pseudomonas sp. A1437
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 5769285..5780631

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB4P95_RS26700 (AB4P95_26660)	-	5769491..5772580 (+)	3090	WP_395598057.1	pilus assembly protein	-
AB4P95_RS26705 (AB4P95_26665)	-	5772596..5772997 (+)	402	WP_395598058.1	type IV pilin protein	-
AB4P95_RS26710 (AB4P95_26670)	thiO	5773055..5774155 (+)	1101	WP_042561133.1	glycine oxidase ThiO	-
AB4P95_RS26715 (AB4P95_26675)	pilR	5774285..5775631 (-)	1347	WP_042561132.1	sigma-54 dependent transcriptional regulator	Regulator
AB4P95_RS26720 (AB4P95_26680)	pilS	5775628..5777217 (-)	1590	WP_395598059.1	sensor histidine kinase	Regulator
AB4P95_RS26725 (AB4P95_26685)	-	5777207..5777440 (-)	234	WP_042561130.1	PP0621 family protein	-
AB4P95_RS26730 (AB4P95_26690)	-	5777567..5778583 (-)	1017	WP_042561129.1	outer membrane protein assembly factor BamD	-
AB4P95_RS26735 (AB4P95_26695)	rluD	5778735..5779697 (+)	963	WP_042561128.1	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	-
AB4P95_RS26740 (AB4P95_26700)	pgeF	5779694..5780416 (+)	723	WP_395598060.1	peptidoglycan editing factor PgeF	-

Sequence

Protein

• Length: 448 a.a.
• Molecular weight: 50066.39 Da
• Isoelectric Point: 6.3269

>NTDB_id=1027220 AB4P95_RS26715 WP_042561132.1 5774285..5775631(-) (pilR) [Pseudomonas sp. A1437]
MNTSPRQKILIVDDEPDIRELLEITLGRMKLNSYSARNLGEAQALLQRETFDLCLTDMRLPDGTGLELVQHIQQRYPQLP
VAMITAYGSLETAINALKAGAFDFLTKPVDLTRLRELVATALRMPAAGDASTSIDRRLLGDSPPMRNLRKQVDKLARSQA
PVYISGESGSGKELVARLIHEQGPRAGKPFVPVNCGAIPSELMESEFFGHRKGSFTGAVEDKPGLFQAAQGGTLFLDEVA
DLPLSMQVKLLRAIQEKAVRSVGGQQETVVDVRILCATHKDLDAEVAAERFRQDLYYRLNVIELRVPPLRERRDDIEVLA
AHMLQRLAKDTGQPAACLHLHALEALKNYRFPGNVRELENVLERAHTLCENRTIEAEDLRLSEGNCAADGAIADLTQIDN
LEDYLENVERKLILQALEETRWNRTAAAQRLSLSFRSMRYRLKKLGLD

Nucleotide

• Length: 1347 bp

>NTDB_id=1027220 AB4P95_RS26715 WP_042561132.1 5774285..5775631(-) (pilR) [Pseudomonas sp. A1437]
TTGAACACGAGCCCACGGCAAAAAATCCTCATCGTCGACGACGAACCCGATATCCGCGAACTCCTGGAAATCACCCTGGG
ACGGATGAAACTCAACAGCTACAGCGCACGCAATCTGGGGGAGGCCCAGGCGCTGTTGCAGCGCGAGACCTTCGACCTGT
GCCTGACAGACATGCGCCTGCCCGATGGCACGGGACTGGAACTGGTGCAGCATATTCAGCAACGTTATCCACAACTGCCG
GTGGCGATGATCACCGCGTACGGCAGCCTGGAAACGGCAATCAATGCGTTGAAGGCGGGAGCTTTCGACTTTCTGACCAA
ACCGGTAGATCTCACCCGACTGCGGGAATTGGTCGCGACAGCACTGCGCATGCCCGCCGCTGGCGACGCAAGCACCTCAA
TTGATCGACGCTTGCTGGGTGATTCGCCGCCGATGCGCAACCTGCGCAAACAAGTCGACAAGCTCGCTCGCAGCCAGGCC
CCGGTGTACATCAGCGGCGAATCCGGCAGCGGCAAAGAGCTGGTCGCACGACTGATCCACGAACAAGGGCCTCGCGCCGG
CAAGCCGTTCGTGCCGGTGAACTGCGGGGCAATACCCTCGGAACTGATGGAAAGCGAGTTTTTCGGCCATCGCAAAGGCA
GTTTTACCGGCGCGGTCGAGGACAAACCGGGCCTGTTCCAGGCAGCACAGGGCGGCACATTGTTTCTCGATGAAGTGGCG
GACTTGCCACTGTCGATGCAGGTGAAGCTGCTGCGGGCGATTCAGGAAAAAGCCGTACGCAGTGTCGGCGGTCAGCAGGA
AACCGTGGTCGATGTGCGCATTCTCTGCGCGACGCACAAGGACCTCGACGCAGAAGTCGCCGCCGAGCGCTTTCGTCAGG
ATCTTTATTACCGGCTAAACGTGATCGAATTGCGTGTGCCGCCCCTGCGCGAGCGACGGGATGACATTGAAGTGCTGGCG
GCGCACATGCTTCAGCGCCTGGCCAAAGACACCGGCCAACCAGCGGCATGCCTGCATCTGCACGCTTTGGAGGCTCTGAA
AAACTATCGGTTTCCGGGGAATGTGCGGGAACTGGAGAACGTGCTCGAACGGGCGCATACCTTGTGCGAGAACCGTACGA
TCGAGGCTGAAGATTTGCGCTTGAGCGAGGGCAACTGTGCAGCGGATGGCGCGATTGCCGATCTGACGCAGATCGACAAT
CTGGAGGATTATCTGGAGAACGTCGAACGTAAACTGATTTTGCAGGCGCTGGAGGAGACCCGCTGGAATCGGACTGCGGC
GGCGCAGCGGTTGAGTCTTTCGTTCCGCTCGATGCGTTATCGCCTGAAGAAACTCGGTCTGGATTGA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (9-118)

• Bacterial regulatory protein, Fis family (HTH_8) (405-445)

• Sigma-54 interaction domain (Sigma54_activat) (139-304)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	79.233	98.884	0.783
pilR	Acinetobacter baumannii strain A118	49.02	100	0.502