Detailed information NTG1026785

Bioinformatically predicted

Overview

• Name: comEA
• Type: Machinery gene
• Locus tag: AB3470_RS13940
• Genome accession: NZ_CP162517
• Coordinates: 2627636..2628253 (-)
• Length: 205 a.a.
• NCBI ID: WP_004398514.1
• Uniprot ID: A0AAE2SLR2
• Organism: Bacillus subtilis strain BF12B1
• Function: dsDNA binding to the cell surface (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2622636..2633253

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB3470_RS13910 (AB3470_13910)	rpsT	2622945..2623211 (+)	267	WP_003229989.1	30S ribosomal protein S20	-
AB3470_RS13915 (AB3470_13915)	holA	2623226..2624269 (-)	1044	WP_015714286.1	DNA polymerase III subunit delta	-
AB3470_RS13920 (AB3470_13920)	-	2624309..2624458 (-)	150	WP_003229985.1	hypothetical protein	-
AB3470_RS13925 (AB3470_13925)	yqzM	2624499..2624633 (+)	135	WP_003229983.1	YqzM family protein	-
AB3470_RS13930 (AB3470_13930)	comEC	2624673..2627003 (-)	2331	WP_080477815.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
AB3470_RS13935 (AB3470_13935)	comEB	2627000..2627569 (-)	570	WP_015714288.1	ComE operon protein 2	-
AB3470_RS13940 (AB3470_13940)	comEA	2627636..2628253 (-)	618	WP_004398514.1	competence protein ComEA	Machinery gene
AB3470_RS13945 (AB3470_13945)	comER	2628337..2629158 (+)	822	WP_004398597.1	late competence protein ComER	-
AB3470_RS13950 (AB3470_13950)	yqeM	2629224..2629967 (-)	744	WP_003229973.1	class I SAM-dependent methyltransferase	-
AB3470_RS13955 (AB3470_13955)	rsfS	2629964..2630320 (-)	357	WP_003229971.1	ribosome silencing factor	-
AB3470_RS13960 (AB3470_13960)	yqeK	2630338..2630898 (-)	561	WP_004399059.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
AB3470_RS13965 (AB3470_13965)	nadD	2630888..2631457 (-)	570	WP_004398676.1	nicotinate-nucleotide adenylyltransferase	-
AB3470_RS13970 (AB3470_13970)	yhbY	2631469..2631759 (-)	291	WP_003226133.1	ribosome assembly RNA-binding protein YhbY	-
AB3470_RS13975 (AB3470_13975)	aroE	2631753..2632595 (-)	843	WP_003229967.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 205 a.a.
• Molecular weight: 21769.45 Da
• Isoelectric Point: 4.7220

>NTDB_id=1026785 AB3470_RS13940 WP_004398514.1 2627636..2628253(-) (comEA) [Bacillus subtilis strain BF12B1]
MNWLNQHKKAIILAASAAVFTAIMIFLATGKNKEPVKQAVPTETENTVVKQEANNDESNETIVIDIKGAVQHPGVYEMRT
GDRVSQAIEKAGGTSEQADEAQVNLAEILQDGTVVYIPKKGEETAVQQGGGGSVQSDGGKGALVNINTATLEELQGISGV
GPSKAEAIIAYREENGRFQTIEDITKVSGIGEKSFEKIKSSITVK

Nucleotide

• Length: 618 bp

>NTDB_id=1026785 AB3470_RS13940 WP_004398514.1 2627636..2628253(-) (comEA) [Bacillus subtilis strain BF12B1]
ATGAATTGGTTGAATCAGCATAAGAAAGCAATTATTTTAGCGGCTTCTGCGGCTGTTTTCACAGCGATTATGATCTTTCT
GGCCACAGGGAAAAATAAAGAGCCGGTGAAGCAAGCTGTACCAACAGAGACAGAAAATACAGTGGTAAAGCAGGAAGCAA
ACAACGACGAGTCAAACGAAACAATTGTGATAGACATCAAAGGTGCTGTTCAGCATCCTGGCGTTTATGAAATGCGAACA
GGGGACAGAGTATCTCAGGCAATTGAGAAAGCGGGCGGGACCAGTGAACAAGCAGACGAAGCGCAAGTAAATTTGGCGGA
GATTCTGCAGGACGGGACAGTGGTGTACATCCCGAAAAAGGGAGAGGAAACAGCAGTGCAGCAAGGTGGCGGAGGGTCTG
TCCAAAGCGATGGAGGGAAGGGAGCGCTGGTGAATATCAATACAGCAACCTTAGAGGAGTTACAAGGCATCTCAGGGGTG
GGGCCATCCAAAGCTGAAGCTATTATTGCATACCGGGAAGAAAACGGTCGTTTCCAAACAATTGAAGATATCACTAAGGT
TTCAGGAATAGGTGAAAAGTCATTTGAGAAAATAAAGTCTTCCATTACAGTAAAGTGA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix motif (HHH_3) (142-203)

• SLBB domain (SLBB) (63-118)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
comEA	Staphylococcus aureus MW2	37.273	100	0.4
comEA	Staphylococcus aureus N315	36.364	100	0.39