Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | AB3447_RS01840 | Genome accession | NZ_CP162456 |
| Coordinates | 348749..349048 (+) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain TUM20915 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 343749..354048
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB3447_RS01800 (AB3447_01800) | - | 343810..344013 (+) | 204 | WP_000087561.1 | YqgQ family protein | - |
| AB3447_RS01805 (AB3447_01805) | - | 344010..344996 (+) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| AB3447_RS01810 (AB3447_01810) | - | 344996..345325 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| AB3447_RS01815 (AB3447_01815) | - | 345322..345945 (+) | 624 | WP_001223010.1 | MBL fold metallo-hydrolase | - |
| AB3447_RS01820 (AB3447_01820) | comGA | 345997..346971 (+) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| AB3447_RS01825 (AB3447_01825) | comGB | 346943..348013 (+) | 1071 | WP_000776422.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| AB3447_RS01830 (AB3447_01830) | comGC | 348027..348338 (+) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| AB3447_RS01835 (AB3447_01835) | comGD | 348316..348762 (+) | 447 | WP_001788899.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| AB3447_RS01840 (AB3447_01840) | comGE | 348749..349048 (+) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| AB3447_RS01845 (AB3447_01845) | comGF | 348966..349463 (+) | 498 | WP_001789864.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| AB3447_RS01850 (AB3447_01850) | - | 349560..349706 (+) | 147 | WP_001789879.1 | hypothetical protein | - |
| AB3447_RS01855 (AB3447_01855) | - | 349696..350220 (+) | 525 | WP_001015121.1 | shikimate kinase | - |
| AB3447_RS01860 (AB3447_01860) | gcvT | 350379..351470 (+) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| AB3447_RS01865 (AB3447_01865) | gcvPA | 351490..352836 (+) | 1347 | WP_117200971.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=1025941 AB3447_RS01840 WP_000844413.1 348749..349048(+) (comGE) [Staphylococcus aureus strain TUM20915]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=1025941 AB3447_RS01840 WP_000844413.1 348749..349048(+) (comGE) [Staphylococcus aureus strain TUM20915]
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |