Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   AB3L01_RS03365 Genome accession   NZ_CP162145
Coordinates   686091..686474 (+) Length   127 a.a.
NCBI ID   WP_000389061.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain SIMBA089     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 681091..691474
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB3L01_RS03355 (AB3L01_03355) - 683992..685110 (-) 1119 WP_001260822.1 efflux RND transporter periplasmic adaptor subunit -
  AB3L01_RS03360 (AB3L01_03360) - 685170..685808 (-) 639 WP_001985941.1 hypothetical protein -
  AB3L01_RS03365 (AB3L01_03365) pilG 686091..686474 (+) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  AB3L01_RS03370 (AB3L01_03370) - 686498..686860 (+) 363 WP_000101096.1 PleD family two-component system response regulator -
  AB3L01_RS03375 (AB3L01_03375) - 686921..687457 (+) 537 WP_000729762.1 chemotaxis protein CheW -
  AB3L01_RS03380 (AB3L01_03380) - 687504..689582 (+) 2079 WP_000505931.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14200.23 Da        Isoelectric Point: 4.5762

>NTDB_id=1024236 AB3L01_RS03365 WP_000389061.1 686091..686474(+) (pilG) [Acinetobacter baumannii strain SIMBA089]
MEDAFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSS

Nucleotide


Download         Length: 384 bp        

>NTDB_id=1024236 AB3L01_RS03365 WP_000389061.1 686091..686474(+) (pilG) [Acinetobacter baumannii strain SIMBA089]
ATGGAAGATGCATTCCAAAATCTGAAAGTAATGGTTATTGATGACTCAAAAACTATTCGCCGTACCGCAGAAACTCTATT
GCAACGCGAAGGTTGCGAAGTGATTACTGCTGTCGATGGATTTGAAGCTTTATCTAAAATTGCTGAAGCGAATCCGGATA
TTGTTTTTGTAGATATCATGATGCCTCGTTTAGACGGTTATCAAACTTGTGCTTTGATTAAGAACTCTCAAAATTATCAG
AACATTCCCGTTATCATGCTCTCTAGTAAAGATGGTTTATTTGATCAGGCAAAAGGGCGTGTGGTAGGTTCAGATGAATA
CTTGACGAAACCTTTTAGCAAAGATGAATTGCTAAATGCGATTCGTAATCATGTAAGTTCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

100

100

1
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37

Multiple sequence alignment