Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   AB3G27_RS14550 Genome accession   NZ_CP162095
Coordinates   2847676..2849982 (-) Length   768 a.a.
NCBI ID   WP_044140820.1    Uniprot ID   -
Organism   Bacillus pumilus strain LBUM494     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 2842676..2854982
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB3G27_RS14510 (AB3G27_14510) - 2843086..2843517 (+) 432 WP_034620105.1 Na(+)/H(+) antiporter subunit B -
  AB3G27_RS14515 (AB3G27_14515) - 2843517..2843858 (+) 342 WP_003213576.1 Na(+)/H(+) antiporter subunit C -
  AB3G27_RS14520 (AB3G27_14520) - 2843851..2845329 (+) 1479 WP_309215906.1 Na+/H+ antiporter subunit D -
  AB3G27_RS14525 (AB3G27_14525) - 2845336..2845815 (+) 480 WP_044140819.1 Na+/H+ antiporter subunit E -
  AB3G27_RS14530 (AB3G27_14530) - 2845815..2846096 (+) 282 WP_003213177.1 Na(+)/H(+) antiporter subunit F1 -
  AB3G27_RS14535 (AB3G27_14535) mnhG 2846080..2846454 (+) 375 WP_003213369.1 monovalent cation/H(+) antiporter subunit G -
  AB3G27_RS14540 (AB3G27_14540) - 2846541..2846930 (-) 390 WP_003213775.1 hotdog fold thioesterase -
  AB3G27_RS14545 (AB3G27_14545) comA 2846954..2847595 (-) 642 WP_003213500.1 response regulator transcription factor Regulator
  AB3G27_RS14550 (AB3G27_14550) comP 2847676..2849982 (-) 2307 WP_044140820.1 ATP-binding protein Regulator
  AB3G27_RS14555 (AB3G27_14555) comX 2849996..2850166 (-) 171 WP_012011107.1 competence pheromone ComX -
  AB3G27_RS14560 (AB3G27_14560) - 2850144..2851067 (-) 924 WP_106029260.1 polyprenyl synthetase family protein -
  AB3G27_RS14565 (AB3G27_14565) degQ 2851219..2851359 (-) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  AB3G27_RS14570 (AB3G27_14570) - 2851865..2852218 (+) 354 WP_212045491.1 inner spore coat protein -
  AB3G27_RS14575 (AB3G27_14575) - 2852249..2853475 (-) 1227 WP_212045764.1 EAL and HDOD domain-containing protein -

Sequence


Protein


Download         Length: 768 a.a.        Molecular weight: 88680.34 Da        Isoelectric Point: 8.1331

>NTDB_id=1024005 AB3G27_RS14550 WP_044140820.1 2847676..2849982(-) (comP) [Bacillus pumilus strain LBUM494]
MRKFYSKLTVILVILSFIYVIYISYINVFNIFVGAAVKENSHGQLEVVDVDNFTDSYLAGVRKGDIILEVNGNKKPVEEV
KRGFLANVKSLVVDRHGDKIDLENVRLLSQANLFIYLIPVILYSICLFCIFMILKMNKANQKESAYILALFLLAVSIGYV
SSGGSGKGEAISRILVIVTMNIVPPLYMHFMYQYLKELGTEIIRRRVLFYLYLVPVTNVLLVLFYKNKAGPVDLLAYVNL
LSFFVLAFLSIIITIRAAKKLKDNEVSNVLRAFALILISAFSPFMLFFIIPYFFGIYFISPYVVASFVLLIPFFLVYQFM
SNKLYNVDFFMGRIKYYGFLAITPTILVVVLFDFIQKPNANFYTVKFTIITYILMLTVFYFKEIIDFRFRLKRFSEKHNY
QDSVFKFTQLIREASSLHQVLYHLKYTILEVLVVNKAFVLEVKADGQIVEIDESIEESQLWKDYVDQFQDILGEVGKIIA
LDKGFMMKIGERGGHSFVICCLSNLRTPKLTRDEISWLKTLAFYTSVSLENVVKIEELMEHLEDLKQREANPAWLKKVMF
AMEEKQRSDLARDLHDSVLQDLISLKRQSEMFLTNFQNDQCPTSIEQSLISWNEQMSKVIQTTRETCHELRPQLLYDLGL
VKAISKLTSQIQEEAPFHIRLNTTRFDKELDIDIDSQLNIYRIVQELLSNALKHSQASQVLVMLICIKDQVVLHYEDDGV
GFDARHLDQHTMSMGLSGIRERVKALNGKLHIHTAPEKGLKVKIEMEL

Nucleotide


Download         Length: 2307 bp        

>NTDB_id=1024005 AB3G27_RS14550 WP_044140820.1 2847676..2849982(-) (comP) [Bacillus pumilus strain LBUM494]
ATGAGAAAGTTTTACTCTAAGTTAACAGTTATATTAGTTATCCTTAGCTTCATCTATGTGATTTATATCTCTTATATCAA
CGTATTTAATATTTTTGTTGGAGCAGCTGTTAAGGAAAATAGTCACGGTCAACTTGAGGTAGTGGATGTCGATAATTTTA
CAGATAGCTATCTAGCTGGAGTTAGAAAAGGCGATATCATACTTGAAGTGAATGGGAATAAAAAACCAGTTGAAGAAGTT
AAAAGAGGTTTTTTAGCTAATGTTAAAAGTTTAGTCGTTGATAGACATGGTGATAAAATTGATTTAGAGAATGTAAGGTT
ATTGAGTCAAGCGAATCTGTTTATTTATCTAATACCAGTCATTCTTTATTCCATCTGTCTATTTTGTATATTTATGATTT
TAAAAATGAATAAAGCAAACCAAAAAGAGTCAGCTTATATTTTAGCTTTATTTCTTTTGGCGGTGTCTATAGGTTATGTA
AGTTCTGGTGGTTCTGGAAAAGGAGAGGCTATCAGTCGTATTCTTGTAATCGTTACAATGAATATTGTACCTCCACTATA
TATGCACTTTATGTATCAATATTTAAAAGAATTAGGAACAGAAATTATTCGTCGTCGAGTTCTTTTTTATTTGTATCTAG
TTCCAGTTACTAACGTTTTATTAGTTTTATTCTATAAAAATAAAGCTGGACCAGTAGATCTATTAGCATATGTCAATTTA
CTTTCATTTTTTGTTTTGGCTTTCCTTTCGATTATTATCACTATAAGGGCTGCTAAAAAATTGAAAGACAATGAAGTCAG
CAATGTACTTCGAGCATTTGCACTCATTTTAATCTCAGCATTCAGTCCATTCATGCTATTTTTTATCATTCCTTATTTTT
TTGGTATATATTTTATTTCACCATATGTTGTAGCATCGTTTGTTCTTTTAATTCCTTTTTTCTTAGTCTATCAATTTATG
TCAAATAAGCTGTATAATGTTGATTTCTTTATGGGGAGGATTAAATACTACGGTTTTTTAGCGATTACACCAACAATACT
AGTGGTTGTTCTTTTTGATTTTATTCAAAAGCCGAATGCAAATTTCTATACAGTGAAATTTACGATCATCACGTACATTC
TTATGCTCACCGTTTTCTACTTTAAAGAAATCATCGATTTCCGCTTTCGTTTGAAGCGTTTTTCAGAGAAGCATAATTAT
CAGGATAGTGTATTTAAATTTACACAGCTTATTCGTGAGGCGTCATCACTTCATCAAGTATTGTATCATTTAAAATACAC
CATCTTAGAAGTACTTGTTGTGAACAAAGCCTTTGTGCTTGAAGTGAAGGCAGATGGACAAATTGTTGAAATTGATGAAT
CAATAGAAGAAAGCCAGCTATGGAAAGATTATGTGGATCAATTTCAAGATATTTTAGGTGAAGTCGGAAAAATCATTGCG
CTTGATAAAGGGTTCATGATGAAAATTGGTGAGCGGGGCGGTCACTCTTTTGTGATTTGCTGTTTATCTAATTTACGTAC
ACCTAAATTGACGCGGGATGAGATTTCTTGGTTGAAAACATTGGCATTTTACACAAGTGTCAGTTTAGAAAATGTCGTCA
AGATTGAAGAATTGATGGAGCATCTTGAAGATTTGAAGCAGCGTGAAGCGAACCCTGCTTGGCTGAAAAAAGTCATGTTT
GCGATGGAGGAAAAACAGCGCTCCGATTTAGCGAGGGATCTTCATGATTCCGTGCTGCAGGATTTGATATCGCTGAAAAG
ACAGTCAGAGATGTTTTTAACGAATTTCCAAAACGATCAATGCCCAACGTCTATTGAACAATCGCTTATCTCATGGAATG
AACAAATGTCTAAGGTGATTCAAACGACGAGAGAAACGTGTCATGAACTTCGGCCGCAGCTGCTGTACGATTTAGGTTTA
GTGAAGGCGATATCGAAGCTGACTTCTCAAATTCAGGAGGAAGCACCATTTCATATTCGGCTGAATACGACACGCTTTGA
TAAGGAGCTGGACATTGATATTGACTCCCAGCTCAATATTTACCGAATTGTTCAGGAGCTGTTATCCAATGCCTTGAAAC
ATTCTCAAGCCAGCCAAGTGCTCGTAATGCTGATTTGTATTAAAGATCAGGTTGTTCTTCACTACGAGGATGATGGAGTT
GGGTTTGACGCAAGACATCTTGATCAGCACACCATGAGCATGGGCCTTTCTGGCATCAGAGAACGAGTCAAGGCGTTAAA
TGGGAAGCTTCACATTCATACCGCACCTGAAAAAGGGCTGAAGGTGAAAATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

49.292

100

0.499


Multiple sequence alignment