Detailed information
Bioinformatically predicted
Overview
| Name | fimU | Type | Machinery gene |
| Locus tag | AB3G53_RS16420 | Genome accession | NZ_CP161999 |
| Coordinates | 3487378..3487851 (-) | Length | 157 a.a. |
| NCBI ID | WP_001214059.1 | Uniprot ID | A0A009PK04 |
| Organism | Acinetobacter baumannii strain SIMBA061 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3482378..3492851
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB3G53_RS16405 (AB3G53_16405) | pilX | 3485007..3485825 (-) | 819 | WP_000149374.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| AB3G53_RS16410 (AB3G53_16410) | pilW | 3485822..3486823 (-) | 1002 | WP_057093627.1 | PilW family protein | Machinery gene |
| AB3G53_RS16415 (AB3G53_16415) | pilV | 3486824..3487384 (-) | 561 | WP_002194578.1 | type IV pilus modification protein PilV | Machinery gene |
| AB3G53_RS16420 (AB3G53_16420) | fimU | 3487378..3487851 (-) | 474 | WP_001214059.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| AB3G53_RS16425 (AB3G53_16425) | ispH | 3488021..3488971 (-) | 951 | WP_000407064.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| AB3G53_RS16430 (AB3G53_16430) | gmk | 3489094..3489723 (+) | 630 | WP_000015937.1 | guanylate kinase | - |
| AB3G53_RS16435 (AB3G53_16435) | rpoZ | 3489796..3490074 (+) | 279 | WP_000135049.1 | DNA-directed RNA polymerase subunit omega | - |
| AB3G53_RS16440 (AB3G53_16440) | - | 3490113..3490243 (+) | 131 | Protein_3204 | hypothetical protein | - |
| AB3G53_RS16445 (AB3G53_16445) | - | 3490284..3492389 (+) | 2106 | WP_001117590.1 | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | - |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 16837.47 Da Isoelectric Point: 9.3085
>NTDB_id=1023401 AB3G53_RS16420 WP_001214059.1 3487378..3487851(-) (fimU) [Acinetobacter baumannii strain SIMBA061]
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWKTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILTKLGTLVFKAEETC
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWKTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILTKLGTLVFKAEETC
Nucleotide
Download Length: 474 bp
>NTDB_id=1023401 AB3G53_RS16420 WP_001214059.1 3487378..3487851(-) (fimU) [Acinetobacter baumannii strain SIMBA061]
ATGAGGGGAATTATTCCACAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCACT
GATGGCTGCGCCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGTCGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGAAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACTCAAAGTTCTTTAAC
GACTACCACTTTAGCTTTTAATGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGACCAAGCTTGGCACTTTAGTTTTTAAGGCCGAGGAGACTTGTTAA
ATGAGGGGAATTATTCCACAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCACT
GATGGCTGCGCCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGTCGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGAAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACTCAAAGTTCTTTAAC
GACTACCACTTTAGCTTTTAATGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGACCAAGCTTGGCACTTTAGTTTTTAAGGCCGAGGAGACTTGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimU | Acinetobacter baumannii D1279779 |
99.363 |
100 |
0.994 |