Detailed information NTG1023396

Bioinformatically predicted

Overview

• Name: pilY2
• Type: Machinery gene
• Locus tag: AB3G53_RS16395
• Genome accession: NZ_CP161999
• Coordinates: 3480646..3481128 (-)
• Length: 160 a.a.
• NCBI ID: WP_001046417.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain SIMBA061
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3475646..3486128

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB3G53_RS16360 (AB3G53_16360)	-	3475753..3476787 (+)	1035	WP_057093625.1	lipase secretion chaperone	-
AB3G53_RS16365 (AB3G53_16365)	-	3476902..3477843 (+)	942	WP_085943440.1	triacylglycerol lipase	-
AB3G53_RS16370 (AB3G53_16370)	rplS	3477896..3478264 (-)	369	WP_000014562.1	50S ribosomal protein L19	-
AB3G53_RS16375 (AB3G53_16375)	trmD	3478472..3479212 (-)	741	WP_000464598.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
AB3G53_RS16380 (AB3G53_16380)	rimM	3479258..3479806 (-)	549	WP_000189236.1	ribosome maturation factor RimM	-
AB3G53_RS16385 (AB3G53_16385)	rpsP	3479826..3480077 (-)	252	WP_000260334.1	30S ribosomal protein S16	-
AB3G53_RS16390 (AB3G53_16390)	pilE	3480224..3480649 (-)	426	WP_000788342.1	type IV pilin protein	Machinery gene
AB3G53_RS16395 (AB3G53_16395)	pilY2	3480646..3481128 (-)	483	WP_001046417.1	type IV pilin protein	Machinery gene
AB3G53_RS16400 (AB3G53_16400)	pilY1	3481141..3484995 (-)	3855	WP_000768965.1	PilC/PilY family type IV pilus protein	Machinery gene
AB3G53_RS16405 (AB3G53_16405)	pilX	3485007..3485825 (-)	819	WP_000149374.1	PilX N-terminal domain-containing pilus assembly protein	Machinery gene

Sequence

Protein

• Length: 160 a.a.
• Molecular weight: 17516.77 Da
• Isoelectric Point: 8.4817

>NTDB_id=1023396 AB3G53_RS16395 WP_001046417.1 3480646..3481128(-) (pilY2) [Acinetobacter baumannii strain SIMBA061]
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGTVTCNVCETNSENWQ

Nucleotide

• Length: 483 bp

>NTDB_id=1023396 AB3G53_RS16395 WP_001046417.1 3480646..3481128(-) (pilY2) [Acinetobacter baumannii strain SIMBA061]
ATGAATAAGTACTCTATTCTACGGTTCAATCAAGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTGGAACAGCATAAATCAAGAAATTTTACTTATAGGGGGTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAGATTACTGATGATACGACGACAGGAAATTTATTGACGAATGCTGCTGCAAATGGGCAAAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAACTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGTCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAACAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA

Domains

Predicted by InterproScan.

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (34-115)

• Prokaryotic N-terminal methylation motif (N_methyl) (10-32)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilY2	Acinetobacter baumannii D1279779	98.125	100	0.981
comE	Acinetobacter baylyi ADP1	41.279	100	0.444