Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   AB2M34_RS01980 Genome accession   NZ_CP161903
Coordinates   375650..375769 (-) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus subtilis strain DYJ24     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 370650..380769
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB2M34_RS01960 (AB2M34_01960) pbpG 371007..373082 (-) 2076 WP_129134415.1 transglycosylase domain-containing protein -
  AB2M34_RS01965 (AB2M34_01965) speE 373285..374115 (+) 831 WP_003227543.1 spermidine synthase -
  AB2M34_RS01970 (AB2M34_01970) speB 374176..375048 (+) 873 WP_003227545.1 agmatinase -
  AB2M34_RS01975 (AB2M34_01975) ywhH 375079..375552 (-) 474 Protein_390 YbaK/EbsC family protein -
  AB2M34_RS01980 (AB2M34_01980) phrF 375650..375769 (-) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  AB2M34_RS01985 (AB2M34_01985) rapF 375753..376898 (-) 1146 WP_021480843.1 response regulator aspartate phosphatase RapF Regulator
  AB2M34_RS01990 (AB2M34_01990) - 376901..377131 (+) 231 Protein_393 hypothetical protein -
  AB2M34_RS01995 (AB2M34_01995) ywhK 377128..378483 (+) 1356 WP_049140945.1 YncE family protein -
  AB2M34_RS02000 (AB2M34_02000) ywhL 378522..379898 (+) 1377 WP_014481223.1 YncE family protein -
  AB2M34_RS02005 (AB2M34_02005) albG 379904..380605 (-) 702 WP_014481222.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=1023036 AB2M34_RS01980 WP_009968329.1 375650..375769(-) (phrF) [Bacillus subtilis strain DYJ24]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=1023036 AB2M34_RS01980 WP_009968329.1 375650..375769(-) (phrF) [Bacillus subtilis strain DYJ24]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment