Detailed information NTG1023037

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: AB2M34_RS01985
• Genome accession: NZ_CP161903
• Coordinates: 375753..376898 (-)
• Length: 381 a.a.
• NCBI ID: WP_021480843.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain DYJ24
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 370753..381898

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB2M34_RS01960 (AB2M34_01960)	pbpG	371007..373082 (-)	2076	WP_129134415.1	transglycosylase domain-containing protein	-
AB2M34_RS01965 (AB2M34_01965)	speE	373285..374115 (+)	831	WP_003227543.1	spermidine synthase	-
AB2M34_RS01970 (AB2M34_01970)	speB	374176..375048 (+)	873	WP_003227545.1	agmatinase	-
AB2M34_RS01975 (AB2M34_01975)	ywhH	375079..375552 (-)	474	Protein_390	YbaK/EbsC family protein	-
AB2M34_RS01980 (AB2M34_01980)	phrF	375650..375769 (-)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
AB2M34_RS01985 (AB2M34_01985)	rapF	375753..376898 (-)	1146	WP_021480843.1	response regulator aspartate phosphatase RapF	Regulator
AB2M34_RS01990 (AB2M34_01990)	-	376901..377131 (+)	231	Protein_393	hypothetical protein	-
AB2M34_RS01995 (AB2M34_01995)	ywhK	377128..378483 (+)	1356	WP_049140945.1	YncE family protein	-
AB2M34_RS02000 (AB2M34_02000)	ywhL	378522..379898 (+)	1377	WP_014481223.1	YncE family protein	-
AB2M34_RS02005 (AB2M34_02005)	albG	379904..380605 (-)	702	WP_014481222.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
AB2M34_RS02010 (AB2M34_02010)	albF	380602..381882 (-)	1281	WP_017696258.1	pitrilysin family protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45603.10 Da
• Isoelectric Point: 5.1493

>NTDB_id=1023037 AB2M34_RS01985 WP_021480843.1 375753..376898(-) (rapF) [Bacillus subtilis strain DYJ24]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKENEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFNFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=1023037 AB2M34_RS01985 WP_021480843.1 375753..376898(-) (rapF) [Bacillus subtilis strain DYJ24]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAACTTCTTCAG
AGGCATGTATGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAAAATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGAAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTAATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

• Tetratricopeptide repeat (TPR_12) (223-290)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	99.213	100	0.992
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572