Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   AB1395_RS02745 Genome accession   NZ_CP161815
Coordinates   525584..526585 (+) Length   333 a.a.
NCBI ID   WP_367783776.1    Uniprot ID   -
Organism   Streptococcus pluranimalium strain SS-15     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 520584..531585
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB1395_RS02720 (AB1395_02720) - 520855..521247 (-) 393 WP_218654131.1 VOC family protein -
  AB1395_RS02725 (AB1395_02725) - 521350..522018 (-) 669 WP_218654132.1 NAD(P)H-dependent oxidoreductase -
  AB1395_RS02730 (AB1395_02730) - 522145..523680 (+) 1536 WP_367783770.1 ClC family H(+)/Cl(-) exchange transporter -
  AB1395_RS02735 (AB1395_02735) - 523695..524255 (+) 561 WP_367783772.1 TIGR00730 family Rossman fold protein -
  AB1395_RS02740 (AB1395_02740) - 524303..525388 (-) 1086 WP_367783774.1 M24 family metallopeptidase -
  AB1395_RS02745 (AB1395_02745) ccpA 525584..526585 (+) 1002 WP_367783776.1 catabolite control protein A Regulator
  AB1395_RS02750 (AB1395_02750) - 526678..528132 (+) 1455 WP_367783778.1 alpha-amylase -
  AB1395_RS02755 (AB1395_02755) - 528205..529203 (+) 999 WP_367783780.1 glycosyltransferase -
  AB1395_RS02760 (AB1395_02760) - 529205..530548 (+) 1344 WP_367783782.1 glycosyltransferase family 4 protein -

Sequence

Protein


Download         Length: 333 a.a.        Molecular weight: 36743.77 Da        Isoelectric Point: 5.0502

>NTDB_id=1022582 AB1395_RS02745 WP_367783776.1 525584..526585(+) (ccpA) [Streptococcus pluranimalium strain SS-15]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRQKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNISNAYFA
LLAKGIDDIAEMYKYNIVLASSDENDDKEVNVVNTLFAKQVDGIIFMGHRLTDKIRAEFSRSRTPVVLAGTIDLEHQLPS
VNIDYEKAVEGVVSDLAKKHQKIAFVSGPLLDDINGKVRLAGYKDALNANGIDYTEGLVFEAKYRYEDGYELAERVINSG
ATAAYVGEDELAVGLLNGLFAAGKRVPEDFEIMTSNDSEIVKYTRPNLSSINQPIYDLGAVAMRMLTKIMNKEELEEKEI
ILNHGVTKRASTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=1022582 AB1395_RS02745 WP_367783776.1 525584..526585(+) (ccpA) [Streptococcus pluranimalium strain SS-15]
ATGAATACAGATGATACTATTACGATTTACGATGTTGCCAGAGAAGCTGGTGTATCGATGGCGACAGTTAGTCGAGTTGT
CAATGGAAACAAAAATGTTAAAGAAAATACTCGGCAAAAAGTACTAGAGGTTATTGACCGTTTAGACTACCGTCCAAATG
CCGTAGCTCGTGGTCTTGCTAGCAAAAAAACCACAACAGTTGGGGTTGTTATTCCAAATATTTCAAATGCTTACTTTGCC
CTCTTAGCCAAAGGGATTGATGATATCGCTGAAATGTACAAATATAACATTGTACTGGCGTCAAGTGATGAGAACGACGA
TAAGGAAGTCAATGTTGTTAATACGCTTTTTGCCAAGCAGGTTGATGGCATTATCTTTATGGGACACCGCCTAACGGATA
AAATTCGTGCTGAGTTCTCACGTTCAAGGACACCAGTAGTTCTTGCAGGTACCATTGACTTAGAACATCAATTACCAAGT
GTTAATATCGATTATGAAAAGGCTGTTGAAGGAGTGGTATCTGACCTAGCTAAAAAACACCAAAAAATCGCCTTTGTCTC
AGGACCACTTCTTGATGATATCAATGGAAAAGTTCGTCTAGCAGGCTATAAGGATGCCCTTAATGCTAATGGTATTGATT
ACACTGAAGGGCTTGTTTTTGAGGCTAAATACCGTTACGAAGATGGTTACGAATTGGCAGAACGTGTGATTAATTCAGGT
GCTACAGCTGCTTATGTTGGAGAAGATGAACTAGCTGTGGGACTCTTGAACGGACTCTTTGCGGCTGGGAAACGTGTGCC
AGAAGACTTTGAAATTATGACAAGTAATGATTCTGAAATTGTCAAATACACACGTCCTAACTTATCTTCAATCAATCAAC
CAATTTACGATTTGGGTGCTGTTGCTATGCGTATGTTAACTAAAATCATGAACAAAGAAGAATTGGAAGAAAAAGAAATC
ATTCTTAATCATGGTGTGACAAAACGTGCATCAACAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, lacI family (LacI)

(8-53)

Periplasmic binding protein-like domain (Peripla_BP_3)

(177-332)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

77.477

100

0.775
  ccpA Streptococcus pneumoniae D39

76.276

100

0.763
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

56.495

99.399

0.562

Multiple sequence alignment