Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG/mmsA   Type   Machinery gene
Locus tag   STAB902_RS01780 Genome accession   NZ_CP007041
Coordinates   353386..355401 (+) Length   671 a.a.
NCBI ID   WP_011054950.1    Uniprot ID   A0A0H2UWB9
Organism   Streptococcus pyogenes STAB902     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 348386..360401
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STAB902_RS01760 (STAB902_01830) - 348683..350353 (+) 1671 WP_011054954.1 amino acid ABC transporter ATP-binding/permease protein -
  STAB902_RS01765 (STAB902_01835) - 350350..350943 (+) 594 WP_002983234.1 MptD family putative ECF transporter S component -
  STAB902_RS01770 (STAB902_01840) - 350940..351620 (+) 681 WP_011054953.1 energy-coupling factor transporter transmembrane component T -
  STAB902_RS01775 (STAB902_01845) - 351557..353011 (+) 1455 WP_011054952.1 ABC transporter ATP-binding protein -
  STAB902_RS01780 (STAB902_01850) recG/mmsA 353386..355401 (+) 2016 WP_011054950.1 ATP-dependent DNA helicase RecG Machinery gene
  STAB902_RS01785 (STAB902_01855) - 355694..356596 (+) 903 WP_011054949.1 ATP-binding cassette domain-containing protein -
  STAB902_RS01790 (STAB902_01860) - 356609..357313 (+) 705 WP_002988556.1 ABC transporter permease -
  STAB902_RS01795 (STAB902_01865) - 357662..358627 (-) 966 WP_011054948.1 asparaginase -
  STAB902_RS01800 (STAB902_01870) - 358700..360088 (+) 1389 WP_009881044.1 Cof-type HAD-IIB family hydrolase -

Sequence

Protein


Download         Length: 671 a.a.        Molecular weight: 75177.97 Da        Isoelectric Point: 7.6898

>NTDB_id=102256 STAB902_RS01780 WP_011054950.1 353386..355401(+) (recG/mmsA) [Streptococcus pyogenes STAB902]
MILTAPMSNLKGFGPKSAEKFQKLDIYTVEDLLLYYPFRYEDFKSKSVFDLVDGEKAVITGLVVTPANVQYYGFKRNRLS
FKLRQGEAVLNVSFFNQPYLADKIELGQEVAVFGKWDATKSAITGMKVLAQVEDDMQPVYRVAQGISQSTLIKAIKSAFE
INAHLELKENLPATLLEKYRLMGRSQACLAMHFPKDITEYKQALRRIKFEELFYFQMNLQVLKAENRSETNGLPILYSKH
AMETKISSLPFILTNAQKRSLDDILSDMSSGAHMNRLLQGDVGSGKTVIAGLSMYAAYTAGFQSALMVPTEILAEQHYIS
LQELFPDLSIAILTSGMKAAVKRTVLAAIANGSVDMIVGTHALIQDSVQYHKLGLVITDEQHRFGVKQRRIFREKGENPD
VLMMTATPIPRTLAITAFGEMDVSVIDELPAGRKPIMTRWVKHEQLGTVLEWVKGELQKDAQVYVISPLIEESEALDLKN
AVALHAELSTYFEGIAKVALVHGRMKNDEKDAIMQDFKDKKSHILVSTTVIEVGVNVPNATIMIIMDADRFGLSQLHQLR
GRVGRGHKQSYAVLVANPKTDSGKKRMTIMTETTDGFVLAESDLKMRGSGEIFGTRQSGIPEFQVADIVEDYPILEEARK
VSAAIVSDPNWIYEKQWQLVAKNIRKKEVYD

Nucleotide


Download         Length: 2016 bp        

>NTDB_id=102256 STAB902_RS01780 WP_011054950.1 353386..355401(+) (recG/mmsA) [Streptococcus pyogenes STAB902]
ATGATATTAACAGCTCCTATGTCCAACTTAAAGGGATTTGGACCAAAATCAGCAGAAAAATTTCAGAAATTAGATATTTA
TACAGTAGAAGATTTACTGCTTTATTATCCGTTTCGCTATGAAGATTTTAAATCAAAATCTGTTTTTGATTTAGTGGATG
GTGAAAAAGCAGTCATTACAGGCTTAGTCGTTACTCCAGCTAATGTACAATATTATGGTTTTAAACGTAACCGTTTAAGT
TTCAAATTGCGTCAAGGGGAAGCTGTCTTAAATGTTAGTTTTTTTAATCAACCCTATTTAGCTGATAAAATAGAACTTGG
TCAAGAGGTAGCTGTTTTTGGTAAATGGGATGCCACTAAATCGGCTATTACTGGGATGAAGGTTTTAGCTCAAGTTGAAG
ATGACATGCAACCTGTTTATCGCGTAGCTCAGGGAATTTCACAGTCTACTTTGATTAAAGCTATTAAGTCAGCTTTTGAA
ATCAATGCGCATTTGGAATTGAAGGAAAATTTACCAGCTACTTTATTGGAAAAATACCGATTGATGGGTCGTAGTCAGGC
TTGTTTAGCTATGCATTTCCCAAAAGATATCACAGAGTATAAGCAAGCGCTCCGTCGGATTAAATTTGAAGAATTATTTT
ACTTTCAAATGAACCTTCAAGTTTTGAAAGCCGAAAATAGATCTGAAACAAATGGTTTGCCTATTCTTTATAGTAAACAT
GCTATGGAGACAAAGATTTCCTCTTTACCTTTTATTCTAACAAATGCTCAAAAGCGCTCTTTAGATGACATATTATCTGA
TATGTCATCGGGAGCTCATATGAATCGTTTATTGCAAGGAGATGTAGGATCAGGAAAGACAGTCATTGCTGGTCTATCAA
TGTATGCAGCTTATACAGCAGGTTTTCAATCGGCTTTGATGGTTCCAACGGAAATCCTAGCTGAACAACACTACATTAGT
CTGCAAGAGTTATTTCCAGATTTATCAATTGCTATATTAACTTCGGGTATGAAAGCCGCTGTCAAGCGTACGGTTTTAGC
AGCTATTGCAAATGGCTCAGTGGATATGATTGTAGGAACTCATGCTCTTATCCAAGACTCGGTACAGTACCATAAACTGG
GGCTTGTCATTACAGACGAGCAACATCGTTTTGGTGTTAAACAGCGTAGAATTTTCCGTGAAAAGGGAGAAAATCCTGAT
GTTTTAATGATGACAGCCACCCCAATTCCCCGAACTCTAGCAATCACAGCTTTTGGAGAAATGGATGTTTCTGTTATTGA
TGAATTACCTGCCGGTCGTAAACCTATTATGACACGCTGGGTGAAACACGAGCAGCTAGGGACTGTGTTGGAATGGGTAA
AAGGTGAATTGCAAAAAGATGCTCAAGTGTATGTCATTTCACCGTTGATTGAAGAATCAGAAGCTTTAGATTTAAAGAAT
GCAGTAGCATTGCATGCTGAATTATCTACTTATTTTGAAGGAATTGCTAAGGTTGCTCTTGTACATGGACGTATGAAAAA
TGATGAAAAAGATGCCATAATGCAAGATTTCAAGGATAAAAAAAGTCATATTTTAGTATCCACAACAGTTATTGAAGTAG
GGGTAAATGTCCCAAATGCAACGATCATGATTATTATGGATGCCGATCGTTTTGGATTAAGCCAGTTACATCAACTTCGT
GGGCGTGTTGGTCGTGGACATAAACAATCATACGCTGTTTTAGTGGCTAATCCCAAAACGGATTCGGGGAAAAAACGAAT
GACAATCATGACAGAAACGACAGATGGTTTCGTTTTGGCTGAGTCGGATTTAAAAATGCGTGGTTCTGGTGAAATCTTTG
GTACTCGTCAGTCTGGAATTCCAGAATTTCAAGTAGCTGATATCGTTGAGGATTATCCTATTTTAGAAGAAGCACGCAAA
GTTTCTGCAGCGATTGTTTCTGATCCTAACTGGATATATGAAAAACAGTGGCAATTAGTAGCAAAAAATATTAGAAAAAA
AGAAGTTTATGATTAA

Domains

Predicted by InterProScan.

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(593-665)

Helicase conserved C-terminal domain (Helicase_C)

(458-566)

RecG wedge domain (RecG_wedge)

(10-157)

DEAD/DEAH box helicase (DEAD)

(254-411)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2UWB9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG/mmsA Streptococcus pneumoniae R6

71.684

100

0.717
  recG/mmsA Streptococcus pneumoniae R36A

71.684

100

0.717
  recG Bacillus subtilis subsp. subtilis str. 168

49.254

99.851

0.492
  recG Neisseria meningitidis strain C311

38.405

100

0.387

Multiple sequence alignment