Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   ABZM97_RS16385 Genome accession   NZ_CP160797
Coordinates   3274758..3277070 (-) Length   770 a.a.
NCBI ID   WP_367386987.1    Uniprot ID   -
Organism   Bacillus vallismortis strain BL-01     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3269758..3282070
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABZM97_RS16345 (ABZM97_16345) - 3270224..3270655 (+) 432 WP_148963957.1 Na(+)/H(+) antiporter subunit B -
  ABZM97_RS16350 (ABZM97_16350) - 3270655..3270996 (+) 342 WP_010329900.1 Na(+)/H(+) antiporter subunit C -
  ABZM97_RS16355 (ABZM97_16355) - 3270989..3272470 (+) 1482 WP_087993402.1 Na+/H+ antiporter subunit D -
  ABZM97_RS16360 (ABZM97_16360) - 3272476..3272952 (+) 477 WP_367386986.1 Na+/H+ antiporter subunit E -
  ABZM97_RS16365 (ABZM97_16365) - 3272952..3273236 (+) 285 WP_087993404.1 Na(+)/H(+) antiporter subunit F1 -
  ABZM97_RS16370 (ABZM97_16370) mnhG 3273220..3273594 (+) 375 WP_087993405.1 monovalent cation/H(+) antiporter subunit G -
  ABZM97_RS16375 (ABZM97_16375) - 3273634..3274014 (-) 381 WP_253268529.1 hotdog fold thioesterase -
  ABZM97_RS16380 (ABZM97_16380) comA 3274033..3274677 (-) 645 WP_202328144.1 two-component system response regulator ComA Regulator
  ABZM97_RS16385 (ABZM97_16385) comP 3274758..3277070 (-) 2313 WP_367386987.1 histidine kinase Regulator
  ABZM97_RS16390 (ABZM97_16390) comX 3277086..3277307 (-) 222 WP_367386988.1 competence pheromone ComX -
  ABZM97_RS16395 (ABZM97_16395) - 3277304..3278173 (-) 870 WP_367386989.1 polyprenyl synthetase family protein -
  ABZM97_RS16400 (ABZM97_16400) degQ 3278358..3278498 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  ABZM97_RS16405 (ABZM97_16405) - 3278788..3278925 (-) 138 WP_176365307.1 hypothetical protein -
  ABZM97_RS16410 (ABZM97_16410) - 3278958..3279323 (+) 366 WP_087993278.1 hypothetical protein -
  ABZM97_RS16415 (ABZM97_16415) pdeH 3279302..3280531 (-) 1230 WP_087993279.1 cyclic di-GMP phosphodiesterase -

Sequence


Protein


Download         Length: 770 a.a.        Molecular weight: 89605.70 Da        Isoelectric Point: 7.9636

>NTDB_id=1022054 ABZM97_RS16385 WP_367386987.1 3274758..3277070(-) (comP) [Bacillus vallismortis strain BL-01]
MYRYINVYKYLSLVFIILSFIYVIFLSYSFVFNIFVGADVKINEEGKLEVTNVVDYTNEYYTGVKKGDIILEVNGEKGSD
IQLKSGRLVNVESLTVERENKSFHLQNVSLISEENLFMYLIPVISYSICLFCIFFVYRINKVRKSTSAYILILFLLFVSV
AYVSACGARRGEEVSTYLLVLTLVSCPILYIHFIYKYFTELGTKLFEKKILILMYMLPLINLLLEDVLSNRLKSSAFLSN
LNLISFFVLVLTVSILIHQGIRKIKQKEQKSILKVLAYTNVLSFSPFIIFFAVPYVFLDKYVSPFSLAAFTLVIPYSLVY
QFMTNRLYNIDFVVGRLKYYGFLAITPTVIVVTIFYYIQQPKDIFYSVKLTIVIYLLMFAVFYFKEIIDFRFKLKRFTEK
FNYQDGIFKFTQLIKQASSVDQVLNHFKNTILEVLNIDNACVYDNSKGEITLISKNNFKDITYKNFEQCVQNFSGEIGKI
REFKQGFIIKIGERGDRSFLVLCFSSYNTFKLTRDEIAWLQTLAFYTNVSLENVMKIEELMVHLEDLKQQESNPVWLKKL
MYTIEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKDDSPCREDVQDKLVQMNEQMSDVISMTRETCHELRPQLLY
DLGLVKALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNRIVLHYEDD
GVGFDQEKNNEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2313 bp        

>NTDB_id=1022054 ABZM97_RS16385 WP_367386987.1 3274758..3277070(-) (comP) [Bacillus vallismortis strain BL-01]
ATGTACAGATATATTAACGTCTATAAATATTTGTCTCTAGTTTTTATCATTTTAAGTTTTATTTATGTTATCTTCCTCTC
TTATAGTTTTGTTTTTAACATCTTCGTAGGTGCAGATGTGAAGATAAATGAAGAAGGTAAGTTAGAGGTCACCAACGTTG
TAGATTATACAAATGAATATTACACAGGTGTGAAAAAGGGTGACATCATTCTTGAAGTAAATGGAGAGAAAGGCAGTGAC
ATTCAATTAAAAAGCGGAAGATTGGTCAATGTAGAAAGCTTAACTGTTGAGAGAGAGAATAAATCATTTCATTTACAAAA
TGTTAGCCTAATAAGTGAAGAAAATTTATTTATGTATCTCATACCAGTAATATCTTATTCAATTTGTTTGTTTTGTATAT
TTTTTGTTTACAGAATAAATAAAGTGAGAAAATCAACTTCAGCTTATATTTTAATTTTATTTTTGTTATTTGTATCAGTG
GCGTATGTAAGTGCCTGCGGCGCAAGAAGAGGGGAAGAGGTTAGCACTTACCTGCTTGTCCTTACTTTAGTAAGTTGTCC
GATTTTATATATTCATTTTATATATAAATACTTTACAGAATTAGGAACCAAGTTATTCGAAAAGAAGATTTTAATCCTTA
TGTATATGCTCCCGCTAATAAACCTTTTATTAGAAGATGTTCTGAGTAATAGATTAAAATCTTCGGCTTTTTTGTCTAAT
CTGAACTTGATTTCTTTCTTTGTCTTAGTTCTTACTGTATCTATTCTTATCCATCAAGGGATAAGAAAAATTAAACAAAA
AGAGCAAAAGTCAATTTTGAAGGTCCTTGCTTATACAAATGTCCTTTCTTTCAGTCCGTTTATCATCTTTTTTGCTGTTC
CATATGTATTTTTGGATAAGTATGTTTCACCTTTTAGTTTGGCTGCTTTTACACTTGTTATACCGTATTCTTTAGTATAT
CAATTTATGACTAATAGACTTTATAATATTGACTTTGTTGTGGGGCGCCTTAAGTACTACGGTTTTTTAGCTATTACGCC
TACTGTTATTGTAGTTACTATATTTTATTATATTCAGCAACCCAAGGATATCTTTTATTCCGTAAAATTAACAATTGTAA
TATATTTGCTTATGTTTGCTGTTTTTTACTTTAAAGAGATCATTGACTTTCGTTTCAAGTTAAAAAGGTTTACGGAGAAA
TTTAATTATCAAGATGGAATTTTTAAATTTACTCAATTAATAAAGCAAGCATCGTCGGTAGATCAAGTACTTAATCATTT
TAAAAATACAATCTTAGAAGTACTAAACATAGATAATGCTTGTGTGTATGATAATTCTAAAGGGGAAATTACACTTATTA
GCAAGAATAACTTCAAAGATATAACTTATAAGAATTTTGAGCAATGTGTCCAAAATTTCTCAGGTGAGATCGGGAAAATA
AGAGAGTTTAAACAGGGTTTTATTATTAAAATAGGTGAACGAGGAGACAGGTCATTTTTAGTACTCTGTTTCTCAAGTTA
TAATACTTTTAAATTAACAAGAGATGAAATTGCATGGCTTCAAACATTAGCGTTTTATACAAATGTTTCATTGGAAAATG
TGATGAAAATCGAAGAATTGATGGTGCATCTTGAAGATTTAAAACAACAAGAATCAAACCCAGTTTGGCTCAAAAAACTC
ATGTACACCATCGAAGAAAAACAACGCTCTGATCTCGCCCGCGATCTCCACGACTCGGTTCTACAGGATTTGATTTCATT
AAAACGTCAGTGCGAGCTGTTTTTGGCTGATTTTAAGAAGGATGATAGTCCGTGCCGGGAAGATGTGCAGGACAAGCTTG
TACAGATGAATGAGCAGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAACTGCGGCCGCAGCTTCTGTAT
GATCTTGGGCTTGTGAAGGCGCTGTCCAAGCTGGTGGCTCAGCAGCAGGAACGGGTTCCGTTTCATATCCGTTTAAATAC
CGGCAGATTTACGGCTTCGCTTGATCTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTCTGTCTAATGCGG
TCAAGCACTCTCAGGCGACGGATGTGCTGATTATGCTCATCAGTATTCAAAACAGGATCGTTCTGCATTATGAGGACGAT
GGTGTAGGATTTGATCAAGAGAAAAATAATGAGCATTCCATGAGTATGGGGCTTTCCGGCATTAAAGAGAGAGTCAGGGC
TTTAGATGGACGCCTTCGGATTGAAACAAGTGAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

55.917

99.87

0.558


Multiple sequence alignment