Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | ABZM97_RS12670 | Genome accession | NZ_CP160797 |
| Coordinates | 2597163..2598233 (-) | Length | 356 a.a. |
| NCBI ID | WP_367386869.1 | Uniprot ID | - |
| Organism | Bacillus vallismortis strain BL-01 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2592163..2603233
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABZM97_RS12625 (ABZM97_12625) | tapA | 2592649..2593410 (-) | 762 | WP_202327199.1 | amyloid fiber anchoring/assembly protein TapA | - |
| ABZM97_RS12630 (ABZM97_12630) | - | 2593672..2594001 (+) | 330 | WP_087990817.1 | YqzG/YhdC family protein | - |
| ABZM97_RS12635 (ABZM97_12635) | - | 2594045..2594224 (-) | 180 | WP_087990697.1 | YqzE family protein | - |
| ABZM97_RS12640 (ABZM97_12640) | comGG | 2594293..2594667 (-) | 375 | WP_367386868.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| ABZM97_RS12645 (ABZM97_12645) | comGF | 2594668..2595075 (-) | 408 | WP_284690388.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| ABZM97_RS12650 (ABZM97_12650) | comGE | 2595077..2595424 (-) | 348 | WP_087990700.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| ABZM97_RS12655 (ABZM97_12655) | comGD | 2595408..2595839 (-) | 432 | WP_087990701.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| ABZM97_RS12660 (ABZM97_12660) | comGC | 2595829..2596125 (-) | 297 | WP_087990702.1 | comG operon protein ComGC | Machinery gene |
| ABZM97_RS12665 (ABZM97_12665) | comGB | 2596139..2597176 (-) | 1038 | WP_202327196.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| ABZM97_RS12670 (ABZM97_12670) | comGA | 2597163..2598233 (-) | 1071 | WP_367386869.1 | competence protein ComGA | Machinery gene |
| ABZM97_RS12675 (ABZM97_12675) | - | 2598449..2598859 (-) | 411 | WP_087990705.1 | CBS domain-containing protein | - |
| ABZM97_RS12680 (ABZM97_12680) | - | 2598922..2599875 (-) | 954 | WP_087990706.1 | magnesium transporter CorA family protein | - |
| ABZM97_RS12685 (ABZM97_12685) | - | 2600019..2601347 (+) | 1329 | WP_087990707.1 | hemolysin family protein | - |
| ABZM97_RS12690 (ABZM97_12690) | - | 2601407..2602246 (-) | 840 | WP_087990708.1 | STAS domain-containing protein | - |
| ABZM97_RS12700 (ABZM97_12700) | mgsR | 2602472..2602849 (-) | 378 | WP_087990709.1 | transcriptional regulator MgsR | - |
Sequence
Protein
Download Length: 356 a.a. Molecular weight: 40418.52 Da Isoelectric Point: 9.0271
>NTDB_id=1022039 ABZM97_RS12670 WP_367386869.1 2597163..2598233(-) (comGA) [Bacillus vallismortis strain BL-01]
MDSIETISRTLIEEAYSTKASDIHIVPREQDAIIHFRVDHALLKKRNMKKEECVRLISHFKFLSAMDIGERRKPQNGSLT
LKLGKGNVHLRMSTLPTINEESLVIRVMPQYNIPSIHKLSLFPKTGATLLSFLKHSHGMLIFTGPTGSGKTTTLYSLVQY
AKKHFNRNIVTLEDPVETRDEDVLQVQVNEKAGVTYSAGLKAILRHDPDIIILGEIRDAETAEIAVRAAMTGHLVLTSLH
TRDAKGAIYRLLEFGINMNEIEQTVIAIAAQRLVDLACPFCENRCSSVYCHQSRNTRRVSVYELLYGKNLQQCIQEAKGN
HANYQYQTLRQIIRKGIALGYLTTNNYDRWVYHETD
MDSIETISRTLIEEAYSTKASDIHIVPREQDAIIHFRVDHALLKKRNMKKEECVRLISHFKFLSAMDIGERRKPQNGSLT
LKLGKGNVHLRMSTLPTINEESLVIRVMPQYNIPSIHKLSLFPKTGATLLSFLKHSHGMLIFTGPTGSGKTTTLYSLVQY
AKKHFNRNIVTLEDPVETRDEDVLQVQVNEKAGVTYSAGLKAILRHDPDIIILGEIRDAETAEIAVRAAMTGHLVLTSLH
TRDAKGAIYRLLEFGINMNEIEQTVIAIAAQRLVDLACPFCENRCSSVYCHQSRNTRRVSVYELLYGKNLQQCIQEAKGN
HANYQYQTLRQIIRKGIALGYLTTNNYDRWVYHETD
Nucleotide
Download Length: 1071 bp
>NTDB_id=1022039 ABZM97_RS12670 WP_367386869.1 2597163..2598233(-) (comGA) [Bacillus vallismortis strain BL-01]
TTGGATTCAATAGAAACGATAAGCAGAACCTTGATTGAAGAGGCGTATTCAACAAAGGCTTCTGACATTCACATTGTGCC
GAGGGAGCAGGACGCCATCATTCATTTTCGGGTAGATCACGCCTTGCTGAAAAAAAGGAACATGAAAAAAGAAGAGTGCG
TAAGACTGATTTCACATTTTAAATTTCTCTCAGCGATGGACATAGGGGAAAGGAGAAAGCCGCAAAATGGTTCGCTTACG
TTAAAACTGGGAAAGGGAAATGTTCATTTAAGAATGTCAACACTTCCCACTATTAATGAAGAAAGCCTCGTGATCAGAGT
GATGCCTCAATACAATATCCCATCAATTCATAAACTGTCGTTATTTCCTAAGACAGGAGCCACTTTACTCTCATTTTTAA
AACATTCTCACGGCATGCTCATTTTTACCGGGCCAACTGGCTCAGGGAAGACCACCACATTATACTCTCTCGTTCAATAT
GCAAAAAAACACTTTAATCGAAATATTGTCACACTGGAAGACCCTGTTGAAACAAGGGACGAGGATGTTCTTCAGGTGCA
GGTGAATGAAAAAGCCGGTGTGACATATTCGGCAGGGCTTAAGGCTATTTTGCGCCATGACCCGGATATAATTATTTTAG
GTGAGATCAGAGACGCGGAAACAGCTGAAATTGCCGTGCGAGCAGCGATGACGGGGCATTTGGTGCTGACGAGCCTTCAT
ACGAGAGATGCGAAGGGCGCGATTTACAGGCTGCTTGAATTCGGCATCAATATGAATGAAATCGAACAGACCGTCATTGC
GATAGCGGCTCAGCGCTTGGTTGATTTAGCTTGCCCGTTTTGTGAAAACAGATGTTCATCGGTATATTGCCACCAGTCTC
GAAACACCAGAAGAGTAAGCGTTTATGAGCTGCTTTACGGAAAAAACCTTCAGCAGTGTATTCAGGAGGCAAAAGGCAAT
CATGCAAATTACCAATATCAAACACTGCGTCAAATTATCAGAAAAGGAATTGCACTTGGCTACTTGACGACAAACAACTA
TGACCGGTGGGTTTATCATGAAACAGATTAG
TTGGATTCAATAGAAACGATAAGCAGAACCTTGATTGAAGAGGCGTATTCAACAAAGGCTTCTGACATTCACATTGTGCC
GAGGGAGCAGGACGCCATCATTCATTTTCGGGTAGATCACGCCTTGCTGAAAAAAAGGAACATGAAAAAAGAAGAGTGCG
TAAGACTGATTTCACATTTTAAATTTCTCTCAGCGATGGACATAGGGGAAAGGAGAAAGCCGCAAAATGGTTCGCTTACG
TTAAAACTGGGAAAGGGAAATGTTCATTTAAGAATGTCAACACTTCCCACTATTAATGAAGAAAGCCTCGTGATCAGAGT
GATGCCTCAATACAATATCCCATCAATTCATAAACTGTCGTTATTTCCTAAGACAGGAGCCACTTTACTCTCATTTTTAA
AACATTCTCACGGCATGCTCATTTTTACCGGGCCAACTGGCTCAGGGAAGACCACCACATTATACTCTCTCGTTCAATAT
GCAAAAAAACACTTTAATCGAAATATTGTCACACTGGAAGACCCTGTTGAAACAAGGGACGAGGATGTTCTTCAGGTGCA
GGTGAATGAAAAAGCCGGTGTGACATATTCGGCAGGGCTTAAGGCTATTTTGCGCCATGACCCGGATATAATTATTTTAG
GTGAGATCAGAGACGCGGAAACAGCTGAAATTGCCGTGCGAGCAGCGATGACGGGGCATTTGGTGCTGACGAGCCTTCAT
ACGAGAGATGCGAAGGGCGCGATTTACAGGCTGCTTGAATTCGGCATCAATATGAATGAAATCGAACAGACCGTCATTGC
GATAGCGGCTCAGCGCTTGGTTGATTTAGCTTGCCCGTTTTGTGAAAACAGATGTTCATCGGTATATTGCCACCAGTCTC
GAAACACCAGAAGAGTAAGCGTTTATGAGCTGCTTTACGGAAAAAACCTTCAGCAGTGTATTCAGGAGGCAAAAGGCAAT
CATGCAAATTACCAATATCAAACACTGCGTCAAATTATCAGAAAAGGAATTGCACTTGGCTACTTGACGACAAACAACTA
TGACCGGTGGGTTTATCATGAAACAGATTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
95.787 |
100 |
0.958 |