Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | ABZM97_RS12665 | Genome accession | NZ_CP160797 |
| Coordinates | 2596139..2597176 (-) | Length | 345 a.a. |
| NCBI ID | WP_202327196.1 | Uniprot ID | - |
| Organism | Bacillus vallismortis strain BL-01 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2591139..2602176
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABZM97_RS12615 (ABZM97_12615) | tasA | 2591245..2592030 (-) | 786 | WP_087990695.1 | biofilm matrix protein TasA | - |
| ABZM97_RS12620 (ABZM97_12620) | sipW | 2592093..2592665 (-) | 573 | WP_087990816.1 | signal peptidase I SipW | - |
| ABZM97_RS12625 (ABZM97_12625) | tapA | 2592649..2593410 (-) | 762 | WP_202327199.1 | amyloid fiber anchoring/assembly protein TapA | - |
| ABZM97_RS12630 (ABZM97_12630) | - | 2593672..2594001 (+) | 330 | WP_087990817.1 | YqzG/YhdC family protein | - |
| ABZM97_RS12635 (ABZM97_12635) | - | 2594045..2594224 (-) | 180 | WP_087990697.1 | YqzE family protein | - |
| ABZM97_RS12640 (ABZM97_12640) | comGG | 2594293..2594667 (-) | 375 | WP_367386868.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| ABZM97_RS12645 (ABZM97_12645) | comGF | 2594668..2595075 (-) | 408 | WP_284690388.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| ABZM97_RS12650 (ABZM97_12650) | comGE | 2595077..2595424 (-) | 348 | WP_087990700.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| ABZM97_RS12655 (ABZM97_12655) | comGD | 2595408..2595839 (-) | 432 | WP_087990701.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| ABZM97_RS12660 (ABZM97_12660) | comGC | 2595829..2596125 (-) | 297 | WP_087990702.1 | comG operon protein ComGC | Machinery gene |
| ABZM97_RS12665 (ABZM97_12665) | comGB | 2596139..2597176 (-) | 1038 | WP_202327196.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| ABZM97_RS12670 (ABZM97_12670) | comGA | 2597163..2598233 (-) | 1071 | WP_367386869.1 | competence protein ComGA | Machinery gene |
| ABZM97_RS12675 (ABZM97_12675) | - | 2598449..2598859 (-) | 411 | WP_087990705.1 | CBS domain-containing protein | - |
| ABZM97_RS12680 (ABZM97_12680) | - | 2598922..2599875 (-) | 954 | WP_087990706.1 | magnesium transporter CorA family protein | - |
| ABZM97_RS12685 (ABZM97_12685) | - | 2600019..2601347 (+) | 1329 | WP_087990707.1 | hemolysin family protein | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39639.96 Da Isoelectric Point: 9.4222
>NTDB_id=1022038 ABZM97_RS12665 WP_202327196.1 2596139..2597176(-) (comGB) [Bacillus vallismortis strain BL-01]
MKQIRKTWPLKDQALLLKRLGEMMAGGYTLLDGLRLMELQMNKRQVADLADAVTHLREGAPFYQVLKSLSFHKEAIGICY
FAVTHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLHSIIIPQFSGIYQSMNMETSRSTDMLFACF
QHSDLMVVSAALFAAGIGLYYWLVFKKKSPVRQMLICVRIPLVGKLVRLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQS
FLPFYRCEAEQVIERLKAGESIEAAICDSPFYETDFSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILIVYLSMLLPMYQMMNQM
MKQIRKTWPLKDQALLLKRLGEMMAGGYTLLDGLRLMELQMNKRQVADLADAVTHLREGAPFYQVLKSLSFHKEAIGICY
FAVTHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLHSIIIPQFSGIYQSMNMETSRSTDMLFACF
QHSDLMVVSAALFAAGIGLYYWLVFKKKSPVRQMLICVRIPLVGKLVRLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQS
FLPFYRCEAEQVIERLKAGESIEAAICDSPFYETDFSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILIVYLSMLLPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=1022038 ABZM97_RS12665 WP_202327196.1 2596139..2597176(-) (comGB) [Bacillus vallismortis strain BL-01]
ATGAAACAGATTAGAAAAACTTGGCCGCTAAAGGATCAAGCCTTGTTATTAAAGCGGCTTGGTGAAATGATGGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAGCTTCAGATGAATAAGAGGCAGGTGGCCGACTTGGCTGACGCGGTCA
CTCATTTGAGGGAAGGGGCTCCGTTTTATCAAGTATTAAAGAGTTTGTCATTTCATAAGGAAGCCATAGGTATTTGTTAT
TTTGCTGTAACACATGGTGAATTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATCGCACAGGCAGA
CCAGCTGAAAAGGGTGCTGCGCTATCCGCTTTTCCTCATCTTTACAGTCGCTGTCATGTTTTATATGTTACATTCCATCA
TCATTCCGCAGTTTTCCGGTATTTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTCGCTTGTTTT
CAGCATAGTGATCTGATGGTCGTTTCGGCTGCTCTTTTTGCAGCAGGTATCGGGCTTTATTATTGGTTGGTGTTTAAGAA
AAAGTCACCTGTCCGGCAAATGCTTATTTGTGTCAGGATACCTTTAGTTGGAAAACTTGTCAGGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAATCG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAGCAAGTGATTGAACGGTTAAAAGCTGGTGAATCTATTGAAGCCGCTATTTG
TGACAGCCCTTTTTATGAAACAGATTTTTCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGCCTAGACAGGGAGCTTT
TCACATACAGCCAGTTCATATTGCAGCGGCTGGAACACAAGGCGCAGAAATGGACAGGCATCCTTCAGCCTATGATTTAT
GGATTTGTTGCTGCGATGATCTTAATTGTGTATTTGTCTATGCTCTTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAACAGATTAGAAAAACTTGGCCGCTAAAGGATCAAGCCTTGTTATTAAAGCGGCTTGGTGAAATGATGGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAGCTTCAGATGAATAAGAGGCAGGTGGCCGACTTGGCTGACGCGGTCA
CTCATTTGAGGGAAGGGGCTCCGTTTTATCAAGTATTAAAGAGTTTGTCATTTCATAAGGAAGCCATAGGTATTTGTTAT
TTTGCTGTAACACATGGTGAATTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATCGCACAGGCAGA
CCAGCTGAAAAGGGTGCTGCGCTATCCGCTTTTCCTCATCTTTACAGTCGCTGTCATGTTTTATATGTTACATTCCATCA
TCATTCCGCAGTTTTCCGGTATTTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTCGCTTGTTTT
CAGCATAGTGATCTGATGGTCGTTTCGGCTGCTCTTTTTGCAGCAGGTATCGGGCTTTATTATTGGTTGGTGTTTAAGAA
AAAGTCACCTGTCCGGCAAATGCTTATTTGTGTCAGGATACCTTTAGTTGGAAAACTTGTCAGGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAATCG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAGCAAGTGATTGAACGGTTAAAAGCTGGTGAATCTATTGAAGCCGCTATTTG
TGACAGCCCTTTTTATGAAACAGATTTTTCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGCCTAGACAGGGAGCTTT
TCACATACAGCCAGTTCATATTGCAGCGGCTGGAACACAAGGCGCAGAAATGGACAGGCATCCTTCAGCCTATGATTTAT
GGATTTGTTGCTGCGATGATCTTAATTGTGTATTTGTCTATGCTCTTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
91.022 |
93.623 |
0.852 |