Detailed information NTG1022000

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: ABZM97_RS02210
• Genome accession: NZ_CP160797
• Coordinates: 436602..437750 (+)
• Length: 382 a.a.
• NCBI ID: WP_087993039.1
• Uniprot ID: -
• Organism: Bacillus vallismortis strain BL-01
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 431602..442750

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABZM97_RS02190 (ABZM97_02190)	-	431982..432662 (-)	681	WP_289346457.1	ABC transporter ATP-binding protein	-
ABZM97_RS02195 (ABZM97_02195)	-	432678..434141 (-)	1464	WP_202328876.1	ABC transporter permease	-
ABZM97_RS02200 (ABZM97_02200)	yclJ	434354..435037 (+)	684	WP_087993041.1	two-component system response regulator YclJ	-
ABZM97_RS02205 (ABZM97_02205)	-	435024..436439 (+)	1416	WP_087993040.1	HAMP domain-containing sensor histidine kinase	-
ABZM97_RS02210 (ABZM97_02210)	rapC	436602..437750 (+)	1149	WP_087993039.1	response regulator aspartate phosphatase RapC	Regulator
ABZM97_RS02215 (ABZM97_02215)	phrC	437734..437856 (+)	123	WP_087993038.1	phosphatase RapC inhibitor PhrC	Regulator
ABZM97_RS02220 (ABZM97_02220)	-	437956..438051 (-)	96	WP_148962990.1	YjcZ family sporulation protein	-
ABZM97_RS02225 (ABZM97_02225)	-	438188..438301 (-)	114	WP_039075856.1	YjcZ family sporulation protein	-
ABZM97_RS02230 (ABZM97_02230)	-	438452..439816 (-)	1365	WP_087993036.1	aspartate kinase	-
ABZM97_RS02235 (ABZM97_02235)	ceuB	440203..441153 (+)	951	WP_087993035.1	petrobactin ABC transporter permease YclN	Machinery gene
ABZM97_RS02240 (ABZM97_02240)	yclO	441146..442093 (+)	948	WP_367387162.1	petrobactin ABC transporter permease YclO	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45538.67 Da
• Isoelectric Point: 5.1321

>NTDB_id=1022000 ABZM97_RS02210 WP_087993039.1 436602..437750(+) (rapC) [Bacillus vallismortis strain BL-01]
MKSGVIPSSAVGQKINEWYKYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEAYYYMKQTYF
SLINIKNAYEIYVEQETYNVRIIQCHFVYGVNLMDERNFEQAASHFKLALDMAEAEQKAQLVGRAYYNLGLCYYNQDILD
PAIDYFEKAVSTFESSRIINSLPQAYFLITLIYYKRGKHDKASAYHKRGYEYAKETDDADYAVKFEFLKSLYQDQPNEIG
IERCFQYLKNKNMYADIEDLALEVAKYYYEQKWFKLSASYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=1022000 ABZM97_RS02210 WP_087993039.1 436602..437750(+) (rapC) [Bacillus vallismortis strain BL-01]
ATGAAGAGCGGGGTGATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAAATATATCCGCACATTCAGCGT
GCCGGATGCCGAAGTGTTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGCAGCATGATTCCAACTTGCTGCTCTATT
ATTCACTAATGGAATTTCGCCACCAGCTTATGCTTGATTATCTTGAGCCGTTAGAGAAATTAAATATCGAGGACCAGCCA
AGCCTGTCTGAATTATCAAGAAACATTGACAGCAACCAGGCGGATCTCAAAGGGCTGCTCGACTACTATGTGAATTTTTT
CCGCGGGATGTATGAATTTGATAAGCGGGAATTTATTTCTGCCATTACATACTATAAACAGGCGGAAAAGAAGCTCTCCT
TTGTCGCAGACCATATTGAACGGGCTGAATTCTATTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTACTTT
TCACTGATCAATATAAAAAACGCCTATGAAATTTATGTGGAGCAGGAAACCTATAATGTGAGAATCATTCAATGCCATTT
CGTCTACGGGGTTAACCTGATGGATGAAAGGAATTTTGAACAAGCCGCAAGCCATTTTAAATTGGCGCTCGATATGGCCG
AAGCAGAACAAAAAGCCCAGCTGGTCGGAAGAGCATACTACAATCTCGGACTATGCTATTACAATCAAGACATTCTCGAC
CCTGCTATTGACTACTTTGAAAAAGCGGTCTCCACGTTTGAAAGCAGCCGGATTATCAATTCACTGCCGCAAGCCTATTT
TTTAATCACCCTGATTTATTATAAACGGGGAAAACATGATAAAGCTTCGGCATATCACAAGCGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGATTACGCGGTAAAATTCGAGTTTTTGAAATCCCTATATCAGGATCAGCCCAATGAAATAGGA
ATCGAACGATGTTTCCAATACTTAAAAAATAAAAATATGTACGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
TTACTATGAACAGAAATGGTTTAAACTGTCTGCTTCCTACTTTCTAAAAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

• Tetratricopeptide repeat (TPR_12) (223-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	96.597	100	0.966
rapF	Bacillus subtilis subsp. subtilis str. 168	57.368	99.476	0.571