Detailed information
Bioinformatically predicted
Overview
| Name | cipB | Type | Regulator |
| Locus tag | SMUFR_RS08790 | Genome accession | NZ_CP007016 |
| Coordinates | 1793219..1793449 (-) | Length | 76 a.a. |
| NCBI ID | WP_002265368.1 | Uniprot ID | Q8DS95 |
| Organism | Streptococcus mutans UA159-FR | ||
| Function | indirect induction of ComX; activation of comRS system (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1788219..1798449
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SMUFR_RS08760 (SMUFR_1651) | - | 1788428..1788616 (-) | 189 | WP_002263743.1 | Blp family class II bacteriocin | - |
| SMUFR_RS08765 (SMUFR_1652) | - | 1788780..1788992 (-) | 213 | WP_002263744.1 | Blp family class II bacteriocin | - |
| SMUFR_RS10540 (SMUFR_1653) | - | 1789397..1789561 (-) | 165 | WP_002265308.1 | hypothetical protein | - |
| SMUFR_RS10885 | - | 1790001..1790213 (+) | 213 | Protein_1687 | IS3 family transposase | - |
| SMUFR_RS08775 (SMUFR_1654) | - | 1790336..1790740 (-) | 405 | WP_002263912.1 | hypothetical protein | - |
| SMUFR_RS08780 (SMUFR_1655) | - | 1790887..1791306 (-) | 420 | WP_002263913.1 | hypothetical protein | - |
| SMUFR_RS08785 (SMUFR_1657) | - | 1792687..1793088 (-) | 402 | WP_002310604.1 | hypothetical protein | - |
| SMUFR_RS08790 (SMUFR_1658) | cipB | 1793219..1793449 (-) | 231 | WP_002265368.1 | Blp family class II bacteriocin | Regulator |
| SMUFR_RS08795 | comC/blpC | 1793716..1793856 (+) | 141 | WP_002267610.1 | ComC/BlpC family leader-containing pheromone/bacteriocin | Regulator |
| SMUFR_RS08800 (SMUFR_1659) | comD/blpH | 1793998..1795323 (-) | 1326 | WP_002262113.1 | sensor histidine kinase | Regulator |
| SMUFR_RS08805 (SMUFR_1660) | comE/blpR | 1795320..1796072 (-) | 753 | WP_002262114.1 | response regulator transcription factor | Regulator |
| SMUFR_RS08810 (SMUFR_1661) | - | 1796544..1797182 (-) | 639 | WP_002262115.1 | VTT domain-containing protein | - |
| SMUFR_RS08815 (SMUFR_1662) | - | 1797229..1797855 (-) | 627 | WP_002262116.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 76 a.a. Molecular weight: 7262.08 Da Isoelectric Point: 3.7781
>NTDB_id=102196 SMUFR_RS08790 WP_002265368.1 1793219..1793449(-) (cipB) [Streptococcus mutans UA159-FR]
MNTQAFEQFNVMDNEALSAVEGGGRGWNCAAGIALGAGQGYMATAGGTAFLGPYAIGTGAFGAIAGGIGGALNSCG
MNTQAFEQFNVMDNEALSAVEGGGRGWNCAAGIALGAGQGYMATAGGTAFLGPYAIGTGAFGAIAGGIGGALNSCG
Nucleotide
Download Length: 231 bp
>NTDB_id=102196 SMUFR_RS08790 WP_002265368.1 1793219..1793449(-) (cipB) [Streptococcus mutans UA159-FR]
ATGAATACACAAGCATTTGAACAATTTAACGTAATGGATAATGAAGCACTTTCAGCTGTTGAAGGTGGGGGCCGCGGATG
GAATTGTGCAGCAGGTATTGCTCTAGGTGCTGGGCAAGGTTATATGGCTACTGCAGGCGGTACAGCATTTCTTGGTCCAT
ATGCTATTGGCACTGGTGCCTTTGGGGCTATTGCTGGAGGAATCGGAGGAGCTCTTAATTCCTGTGGTTAG
ATGAATACACAAGCATTTGAACAATTTAACGTAATGGATAATGAAGCACTTTCAGCTGTTGAAGGTGGGGGCCGCGGATG
GAATTGTGCAGCAGGTATTGCTCTAGGTGCTGGGCAAGGTTATATGGCTACTGCAGGCGGTACAGCATTTCTTGGTCCAT
ATGCTATTGGCACTGGTGCCTTTGGGGCTATTGCTGGAGGAATCGGAGGAGCTCTTAATTCCTGTGGTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| cipB | Streptococcus mutans UA159 |
100 |
100 |
1 |