Detailed information NTG1021653

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: AB1H94_RS07205
• Genome accession: NZ_CP160620
• Coordinates: 1569133..1571349 (+)
• Length: 738 a.a.
• NCBI ID: WP_140174562.1
• Uniprot ID: -
• Organism: Pseudomonas fulva strain NY4814
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1564133..1576349

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB1H94_RS07185 (AB1H94_07185)	-	1565997..1566620 (+)	624	WP_059183203.1	glutathione S-transferase	-
AB1H94_RS07190 (AB1H94_07190)	-	1566766..1567698 (+)	933	WP_027914346.1	ABC transporter ATP-binding protein	-
AB1H94_RS07195 (AB1H94_07195)	-	1567695..1568474 (+)	780	WP_023533108.1	ABC transporter permease	-
AB1H94_RS07200 (AB1H94_07200)	-	1568358..1568990 (-)	633	WP_367239262.1	DUF2062 domain-containing protein	-
AB1H94_RS07205 (AB1H94_07205)	comA	1569133..1571349 (+)	2217	WP_140174562.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
AB1H94_RS07210 (AB1H94_07210)	exbB	1571411..1572046 (+)	636	WP_104925955.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
AB1H94_RS07215 (AB1H94_07215)	-	1572043..1572477 (+)	435	WP_028687688.1	biopolymer transporter ExbD	-
AB1H94_RS07220 (AB1H94_07220)	lpxK	1572477..1573478 (+)	1002	WP_104925956.1	tetraacyldisaccharide 4'-kinase	-
AB1H94_RS07225 (AB1H94_07225)	-	1573521..1573706 (+)	186	WP_003247142.1	Trm112 family protein	-
AB1H94_RS07230 (AB1H94_07230)	kdsB	1573703..1574464 (+)	762	WP_023533083.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
AB1H94_RS07235 (AB1H94_07235)	-	1574464..1574928 (+)	465	WP_027914351.1	low molecular weight protein-tyrosine-phosphatase	-
AB1H94_RS07240 (AB1H94_07240)	murB	1574925..1575944 (+)	1020	WP_104925957.1	UDP-N-acetylmuramate dehydrogenase	-

Sequence

Protein

• Length: 738 a.a.
• Molecular weight: 79545.25 Da
• Isoelectric Point: 10.7480

>NTDB_id=1021653 AB1H94_RS07205 WP_140174562.1 1569133..1571349(+) (comA) [Pseudomonas fulva strain NY4814]
MRTGMLALALGLLSLGLVPQLPSVGWLLLLAAGAVVSLFTRGWLLGVFLLGFCWACWSAKQAMDDRLAPGLEGRTLWLEG
RVVGLPARTAQGVRFDLEGAHSRRAELPQRLQLSWFDGPPLRAGEQWRLAVTLQRPGGLLNPHGPDREAQLLARRVGASG
TVKAGQLLTPAPAGWRDALRERLLAVEANGRQAALVALVLGDGAGLAREDWQVLQATGTVHLLVISGQHIGLVAGLLYAV
VAWLARWGLWPARVPWLPWACALAMSAALAYGWLAGAGVQVQRACLMLAVVLLWRLRFRHLGAFHPLLLALVAVLLFEPL
AALLPGFWLSFGAVATLIYTFSARLGAWQPWQAWTRAQWVIAVGLLPVLLAVGLPVSLSAPLANLVAVPWVSLAVLPLAL
LGTLLLPLGSAGEALLWLAGGLLDILFRALALVAQQRPAWVPPALPLWAWLLVCLGALLLLLPRGVPLRGLGAVMLVALW
APREPVPDGQVEVWQLDVGQGLAVLLRTRQHSLLYDAGPARGESDLGERVVLPTLRKLGVDSLDLLVVSHAHADHAGGAG
AIGRGLPIRRAIGGEPLEAVQLQPCVSGEQWEWDGVRFSLWRWADARTSNDRSCVLLVEASGERLLLAGDMEAGAERAWL
AAMDSPRIDWLQSPHHGSRSSSSEAFIRAAAPRGVLISRGRNNSFGHPHAQVVERYRRHGMTLHDTAVEGALHLVLGVQG
KVEGMRSQRRFWRDARGG

Nucleotide

• Length: 2217 bp

>NTDB_id=1021653 AB1H94_RS07205 WP_140174562.1 1569133..1571349(+) (comA) [Pseudomonas fulva strain NY4814]
ATGCGCACAGGGATGTTGGCGCTTGCACTCGGTCTGCTCAGCCTCGGCCTGGTGCCTCAACTGCCATCGGTCGGATGGCT
GTTATTGCTTGCGGCGGGCGCTGTCGTCAGTCTGTTCACCCGCGGGTGGTTACTGGGCGTGTTCCTGCTGGGCTTTTGCT
GGGCTTGCTGGTCTGCCAAGCAGGCCATGGATGATCGTCTGGCGCCAGGGCTCGAGGGTCGCACGTTATGGCTGGAAGGG
CGCGTGGTCGGCCTGCCGGCGCGCACCGCGCAAGGCGTTCGCTTCGACCTTGAGGGGGCGCATTCCCGGCGTGCCGAATT
GCCGCAACGCCTGCAATTGAGCTGGTTTGACGGGCCACCGCTGCGTGCCGGCGAGCAGTGGCGCCTGGCCGTGACCCTGC
AGCGGCCGGGCGGGCTTTTGAACCCCCACGGGCCTGACCGGGAGGCGCAGTTGCTGGCACGCCGGGTCGGCGCCAGCGGA
ACGGTCAAAGCCGGGCAGTTACTGACGCCCGCGCCAGCCGGCTGGCGCGATGCGCTGCGCGAGCGGCTGCTGGCTGTCGA
GGCCAATGGTCGGCAAGCCGCGCTGGTGGCGCTGGTGCTTGGCGATGGGGCAGGCCTGGCACGCGAGGACTGGCAGGTGC
TACAGGCAACCGGCACCGTGCACCTGCTGGTGATTTCGGGCCAGCACATCGGTCTGGTGGCGGGTCTGCTCTACGCCGTG
GTCGCGTGGTTGGCCCGCTGGGGGCTGTGGCCGGCCCGGGTGCCGTGGCTGCCTTGGGCCTGTGCGCTGGCGATGAGTGC
GGCGCTGGCCTACGGCTGGCTGGCTGGGGCAGGGGTGCAAGTACAGCGCGCCTGTCTGATGCTGGCCGTGGTGCTGCTGT
GGCGGCTGCGCTTTCGTCATCTGGGTGCGTTTCACCCCTTGTTACTTGCGCTGGTTGCCGTACTGCTGTTCGAGCCATTG
GCAGCGCTGCTTCCAGGTTTCTGGTTGTCATTCGGCGCCGTGGCCACGCTCATCTACACCTTCAGTGCCCGGCTAGGGGC
TTGGCAACCCTGGCAGGCCTGGACGCGAGCGCAGTGGGTCATCGCCGTCGGGCTGCTCCCAGTGCTGCTGGCGGTGGGCT
TGCCGGTGAGCCTGAGTGCCCCGCTGGCCAACCTGGTGGCGGTGCCGTGGGTGAGCTTGGCGGTATTGCCGCTGGCGCTA
TTGGGCACCTTGTTGCTGCCCTTGGGAAGCGCAGGTGAGGCCTTGCTGTGGCTGGCAGGCGGCCTGCTGGATATCTTGTT
TCGCGCCTTGGCGCTGGTCGCCCAGCAGCGCCCGGCATGGGTGCCTCCCGCATTGCCGTTGTGGGCCTGGCTGCTGGTCT
GCCTGGGTGCACTGCTGCTGTTGCTGCCACGGGGTGTGCCGCTGCGTGGGTTGGGTGCGGTGATGCTCGTGGCGCTCTGG
GCACCTCGCGAGCCTGTCCCGGATGGCCAAGTCGAGGTGTGGCAGCTGGACGTGGGCCAAGGCTTGGCGGTGTTGCTGCG
TACCCGGCAGCACAGTCTGCTGTATGACGCAGGTCCAGCCAGGGGTGAAAGCGATCTGGGTGAACGGGTCGTGTTGCCCA
CCTTGCGCAAGTTGGGGGTCGACAGCCTGGATCTGCTGGTGGTCAGTCACGCCCATGCCGATCACGCCGGCGGTGCAGGT
GCAATCGGGCGCGGGCTGCCGATCAGGCGGGCGATTGGCGGTGAGCCGCTGGAAGCGGTTCAGTTACAGCCTTGCGTCAG
TGGCGAGCAGTGGGAGTGGGACGGCGTGCGCTTTTCCCTGTGGCGCTGGGCGGATGCGCGCACCAGCAATGACCGCTCCT
GCGTGTTGCTGGTCGAGGCGTCGGGCGAGCGTTTGCTGCTGGCCGGGGACATGGAGGCGGGGGCCGAACGTGCGTGGCTG
GCTGCCATGGACTCACCACGCATCGACTGGCTGCAGTCGCCTCACCACGGCAGCCGCAGTTCGTCGAGCGAAGCCTTCAT
CCGCGCTGCAGCCCCGCGTGGGGTACTGATATCCCGCGGGCGCAACAACAGCTTCGGGCATCCCCATGCACAGGTGGTCG
AACGCTATCGCAGGCATGGCATGACCCTTCACGACACGGCGGTGGAGGGGGCGTTGCATCTGGTGCTCGGTGTGCAAGGA
AAGGTCGAGGGTATGCGCAGCCAGCGTCGGTTCTGGCGTGACGCCAGGGGTGGTTAA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (198-464)

• Metallo-beta-lactamase superfamily (Lactamase_B) (497-677)

• Domain of unknown function (DUF4131) (DUF4131) (23-167)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	58.275	97.425	0.568
comA	Ralstonia pseudosolanacearum GMI1000	35.294	100	0.374