Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ABZP31_RS12020 Genome accession   NZ_CP160437
Coordinates   2566483..2566866 (-) Length   127 a.a.
NCBI ID   WP_005018759.1    Uniprot ID   -
Organism   Acinetobacter sp. FL     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2561483..2571866
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABZP31_RS12005 (ABZP31_12005) - 2563425..2565506 (-) 2082 WP_248134151.1 methyl-accepting chemotaxis protein -
  ABZP31_RS12010 (ABZP31_12010) - 2565552..2566088 (-) 537 WP_005406522.1 chemotaxis protein CheW -
  ABZP31_RS12015 (ABZP31_12015) - 2566093..2566461 (-) 369 WP_005018768.1 response regulator -
  ABZP31_RS12020 (ABZP31_12020) pilG 2566483..2566866 (-) 384 WP_005018759.1 twitching motility response regulator PilG Regulator
  ABZP31_RS12025 (ABZP31_12025) - 2567204..2567785 (+) 582 WP_248134202.1 hypothetical protein -
  ABZP31_RS12030 (ABZP31_12030) - 2567848..2568975 (+) 1128 WP_248088164.1 efflux RND transporter periplasmic adaptor subunit -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14269.38 Da        Isoelectric Point: 4.7278

>NTDB_id=1021135 ABZP31_RS12020 WP_005018759.1 2566483..2566866(-) (pilG) [Acinetobacter sp. FL]
MEDKFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSV

Nucleotide


Download         Length: 384 bp        

>NTDB_id=1021135 ABZP31_RS12020 WP_005018759.1 2566483..2566866(-) (pilG) [Acinetobacter sp. FL]
ATGGAAGACAAGTTTCAAAACCTTAAGGTTATGGTAATCGATGATTCAAAAACTATTCGCCGTACAGCAGAAACTTTGCT
GCAACGTGAGGGCTGTGAGGTAATTACCGCAGTTGATGGTTTTGAAGCATTGTCCAAGATTGCCGAAGCCAATCCTGATA
TTGTCTTTGTCGATATCATGATGCCGCGTCTAGATGGTTACCAGACCTGTGCACTGATTAAAAACTCACAAAATTATCAG
AATATACCGGTCATTATGCTGTCTAGTAAAGATGGGCTATTTGATCAGGCTAAAGGTCGTGTAGTGGGTTCGGATGAATA
TCTGACCAAACCGTTTAGTAAAGACGAATTGCTCAATGCAATACGTAATCATGTCAGTGTCTAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

99.206

99.213

0.984
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37

Multiple sequence alignment