Detailed information    

insolico Bioinformatically predicted

Overview


Name   comA/comEC   Type   Machinery gene
Locus tag   ABZP31_RS09890 Genome accession   NZ_CP160437
Coordinates   2118853..2121294 (-) Length   813 a.a.
NCBI ID   WP_026443956.1    Uniprot ID   A0A062BYK1
Organism   Acinetobacter sp. FL     
Function   ssDNA transport through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 2113853..2126294
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABZP31_RS09865 (ABZP31_09865) purM 2114178..2115248 (+) 1071 WP_248133825.1 phosphoribosylformylglycinamidine cyclo-ligase -
  ABZP31_RS09870 (ABZP31_09870) purN 2115255..2115887 (+) 633 WP_005404404.1 phosphoribosylglycinamide formyltransferase -
  ABZP31_RS09875 (ABZP31_09875) - 2115949..2116746 (-) 798 WP_005405286.1 alpha/beta hydrolase -
  ABZP31_RS09880 (ABZP31_09880) sppA 2116764..2117780 (-) 1017 WP_005404402.1 signal peptide peptidase SppA -
  ABZP31_RS09885 (ABZP31_09885) - 2117910..2118860 (+) 951 WP_005404401.1 lysophospholipid acyltransferase family protein -
  ABZP31_RS09890 (ABZP31_09890) comA/comEC 2118853..2121294 (-) 2442 WP_026443956.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  ABZP31_RS09895 (ABZP31_09895) lolD 2121379..2122062 (-) 684 WP_005019272.1 lipoprotein-releasing ABC transporter ATP-binding protein LolD -
  ABZP31_RS09900 (ABZP31_09900) - 2122055..2123290 (-) 1236 WP_005019271.1 lipoprotein-releasing ABC transporter permease subunit -
  ABZP31_RS09905 (ABZP31_09905) - 2123316..2123888 (+) 573 WP_005019270.1 PilZ domain-containing protein -
  ABZP31_RS09910 (ABZP31_09910) - 2123898..2124812 (-) 915 WP_005404399.1 EamA family transporter -
  ABZP31_RS09915 (ABZP31_09915) - 2124821..2125291 (-) 471 WP_248087296.1 YaiI/YqxD family protein -

Sequence


Protein


Download         Length: 813 a.a.        Molecular weight: 92740.83 Da        Isoelectric Point: 8.8784

>NTDB_id=1021131 ABZP31_RS09890 WP_026443956.1 2118853..2121294(-) (comA/comEC) [Acinetobacter sp. FL]
MWKTILLAWIAGISVMGKTFNLPVFLLPGLMIFSVGSGLLYWYQYSKLESHHPIPWLSRAVFILALGILTGTLGYRYADH
ALEQRLDNRETETRNIEAIVYIRHIDERSEKQIRQKVEVLDQKKQPVQWWLTFKNIPEQPIKFELGEYYRIYGEVIPAHG
YAMPGVFDQEKWFIQQNIMASVKIWKIEKLDHEAVYRLGFNQYLNNQQGWINGLLLLMERQRYHFRTFIQNSTLKNKGLI
LALLTGDKSLLSSETEEQFQRLGISHLLAISGPHVLIFAALVSWVLQTLIRLYGPKLYLSLPRPYLLVFPFCFCVLLYSA
FVGFEIPALRTLLITLLGSSLLLLRQKIQALSLLLASASLLLWIDPFSVLSAAFWLSFGACFILLRIYESIDRQPAQPAF
NWKQRVLTAGKLLIESQGKIFIALFPLVLIFFKQVSWIAPLTNILVIPLLGAVVVPLDILAACLSYIISPLGLLLFHCSD
LGLNLGLWILEILDHLFNPQLQGIAFTPLLIVSLSIGLIILYLPRSVIPKAWALLCFVPVFTSRAPDSDFKLTVLDVGQG
QAILLQSSQQKIMLDTGGYYDETKFSIGQQILAPFLFSQGIARLDRVLLTHLDQDHSGALLPLSQKIKIDEVIANTQLPE
TWNIKQSSPCREGQSWSYQNFKVQVLSPGLNTYPSMVEANPNEYSCVLYVQLNQAQPYRNFLIMGDAGWPTEYELMKKYP
ELQVDVLVLGHHGSKHSSAYSFLKYLHPKLAIASAGQNNRYGHPTKEVKVRLKALDIPLLLTAQTGNIEFYQEADEQINY
TLYREQWKWLKIK

Nucleotide


Download         Length: 2442 bp        

>NTDB_id=1021131 ABZP31_RS09890 WP_026443956.1 2118853..2121294(-) (comA/comEC) [Acinetobacter sp. FL]
ATGTGGAAAACTATTTTATTGGCCTGGATTGCTGGAATCTCGGTCATGGGGAAAACTTTTAACTTACCTGTTTTTCTGTT
ACCTGGACTGATGATCTTCAGCGTAGGTTCAGGGCTATTATATTGGTATCAATATAGTAAGCTGGAGTCGCACCATCCGA
TTCCATGGTTATCTAGAGCAGTTTTTATTCTAGCCTTAGGCATCCTGACAGGCACATTGGGTTATCGCTACGCTGACCAT
GCGCTAGAACAACGTCTAGATAACAGGGAAACAGAAACAAGAAATATTGAGGCAATTGTTTATATCCGACATATTGATGA
GCGTTCTGAGAAGCAGATCAGGCAAAAAGTGGAAGTACTTGACCAGAAAAAACAGCCTGTTCAATGGTGGCTCACATTTA
AAAATATACCTGAGCAACCTATAAAATTTGAGTTAGGAGAATATTACCGGATTTATGGGGAAGTCATACCTGCTCATGGA
TATGCCATGCCGGGAGTATTTGATCAGGAAAAATGGTTTATTCAGCAGAATATCATGGCCAGTGTAAAAATCTGGAAAAT
AGAGAAATTGGACCATGAGGCAGTTTACCGGCTTGGTTTTAATCAATATCTGAATAATCAACAGGGTTGGATCAATGGTC
TTCTATTACTGATGGAGCGGCAGCGCTATCATTTTCGTACTTTTATTCAAAATAGCACACTGAAAAATAAAGGCCTGATT
TTAGCACTTCTTACAGGTGATAAAAGCTTACTTTCCTCTGAAACAGAAGAACAATTTCAGCGGCTGGGAATCAGTCACCT
GCTGGCAATTTCTGGCCCACACGTATTAATTTTCGCAGCTCTGGTCAGCTGGGTATTGCAAACCCTGATACGGCTGTATG
GTCCAAAACTCTATTTAAGCTTGCCTCGCCCTTATCTGCTGGTTTTTCCTTTCTGTTTTTGTGTATTACTTTACAGCGCT
TTTGTCGGTTTCGAGATTCCGGCACTACGAACACTGCTCATTACTCTGCTAGGGAGTAGCCTGCTTTTATTAAGACAAAA
AATCCAGGCATTAAGCTTATTGCTGGCAAGTGCCAGTTTACTATTATGGATAGATCCTTTTAGTGTTCTCTCGGCAGCTT
TCTGGCTTTCTTTCGGGGCCTGTTTTATTCTGTTGCGCATTTATGAAAGTATAGATCGGCAGCCTGCCCAACCGGCTTTT
AACTGGAAGCAAAGAGTTTTAACTGCTGGAAAGTTACTGATTGAATCACAAGGGAAAATTTTTATTGCTCTCTTTCCGTT
AGTACTGATTTTTTTCAAACAGGTAAGCTGGATTGCGCCATTGACCAATATTCTTGTCATTCCATTATTAGGTGCTGTCG
TAGTGCCGCTAGATATACTGGCTGCATGTCTTTCCTATATCATTTCTCCTTTGGGCCTGCTTTTATTTCATTGTAGCGAT
TTAGGCTTGAATTTAGGCTTGTGGATATTAGAAATACTGGACCATCTGTTTAATCCCCAATTACAGGGAATTGCATTTAC
ACCGTTGCTTATTGTGAGCCTCAGTATCGGCCTGATTATTTTATATCTGCCTCGATCTGTTATTCCTAAAGCTTGGGCGC
TGTTATGTTTTGTACCAGTTTTTACGAGTAGGGCACCAGACTCGGATTTTAAGTTAACCGTTTTAGATGTAGGGCAGGGC
CAAGCCATTCTACTTCAGAGTAGTCAGCAAAAAATAATGTTAGATACAGGCGGTTACTATGATGAAACCAAATTCAGTAT
AGGCCAGCAAATTCTTGCACCATTTTTATTTTCCCAAGGGATAGCTCGCTTAGATCGGGTGCTATTAACTCATCTGGATC
AGGATCATAGCGGGGCACTCTTACCATTAAGCCAAAAAATTAAAATCGATGAAGTAATAGCCAATACCCAGTTACCTGAA
ACATGGAATATAAAACAGTCATCACCATGCCGGGAAGGACAAAGCTGGTCTTATCAGAATTTTAAGGTCCAGGTACTATC
ACCTGGCTTAAATACTTACCCATCAATGGTAGAAGCCAATCCGAATGAATATTCATGTGTGTTATATGTGCAATTAAACC
AGGCCCAGCCTTACCGGAATTTCTTGATTATGGGAGATGCTGGCTGGCCAACTGAATATGAACTCATGAAAAAGTATCCC
GAACTTCAAGTCGACGTACTAGTATTGGGTCACCATGGCAGTAAGCACAGTTCTGCTTACAGTTTTCTAAAATATTTGCA
TCCTAAGCTGGCAATTGCCTCAGCAGGACAGAATAACCGTTATGGTCACCCGACCAAAGAAGTTAAGGTACGTCTAAAGG
CACTTGATATTCCACTTCTTTTAACTGCCCAAACCGGTAATATTGAATTTTATCAAGAAGCTGATGAACAAATAAATTAC
ACTCTCTATAGAGAGCAGTGGAAATGGTTAAAGATTAAGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A062BYK1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA/comEC Acinetobacter baylyi ADP1

50

100

0.506

  comA/comEC Acinetobacter baumannii strain A118

50.311

99.016

0.498

  comA/comEC Acinetobacter baumannii D1279779

50.311

99.016

0.498


Multiple sequence alignment