Detailed information NTG1020992

Bioinformatically predicted

Overview

• Name: recJ
• Type: Machinery gene
• Locus tag: DQM52_RS06690
• Genome accession: NZ_LS483367
• Coordinates: 1280912..1283119 (-)
• Length: 735 a.a.
• NCBI ID: WP_015057673.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae subsp. equisimilis strain NCTC5371
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1275912..1288119

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQM52_RS06660 (NCTC5371_01365)	-	1276308..1277129 (-)	822	WP_015017116.1	ZIP family metal transporter	-
DQM52_RS06665 (NCTC5371_01366)	-	1277147..1277935 (-)	789	WP_003054664.1	Nif3-like dinuclear metal center hexameric protein	-
DQM52_RS06670 (NCTC5371_01367)	-	1277925..1278611 (-)	687	WP_003054660.1	tRNA (adenine(22)-N(1))-methyltransferase TrmK	-
DQM52_RS06675 (NCTC5371_01368)	nth	1278692..1279348 (-)	657	WP_003054655.1	endonuclease III	-
DQM52_RS06680 (NCTC5371_01369)	-	1279345..1280028 (-)	684	WP_111681795.1	DnaD domain-containing protein	-
DQM52_RS06685 (NCTC5371_01370)	-	1280246..1280764 (-)	519	WP_003054649.1	adenine phosphoribosyltransferase	-
DQM52_RS06690 (NCTC5371_01371)	recJ	1280912..1283119 (-)	2208	WP_015057673.1	single-stranded-DNA-specific exonuclease RecJ	Machinery gene
DQM52_RS06695 (NCTC5371_01372)	-	1283116..1283880 (-)	765	WP_003054659.1	SDR family oxidoreductase	-
DQM52_RS06700 (NCTC5371_01373)	rnz	1283880..1284809 (-)	930	WP_111681796.1	ribonuclease Z	-
DQM52_RS06705 (NCTC5371_01374)	-	1284824..1285459 (-)	636	WP_012767138.1	cystathionine beta-lyase	-
DQM52_RS06710 (NCTC5371_01375)	hflX	1285452..1286690 (-)	1239	WP_015057674.1	GTPase HflX	-
DQM52_RS06715 (NCTC5371_01376)	miaA	1286778..1287662 (-)	885	WP_003057843.1	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	-
DQM52_RS06720 (NCTC5371_01377)	-	1287795..1287971 (+)	177	WP_012767140.1	DUF3042 family protein	-

Sequence

Protein

• Length: 735 a.a.
• Molecular weight: 82147.05 Da
• Isoelectric Point: 4.7219

>NTDB_id=1020992 DQM52_RS06690 WP_015057673.1 1280912..1283119(-) (recJ) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC5371]
MIKSKYSWKIKDKKPDDGFFKLAKTKGLTQTAAQLIYERGIRTEEALDEFLTADLSQLHDPYLLHDMAKAVPRIRQAIEE
GERILIYGDYDADGMTSASIVKETLDMMGAEPLVYLPNRFTDGYGPNQSVYKYFIEQEAVSLIITVDNGVAGHEAIRYAQ
EQEVDVIVTDHHSLPEELPEAFAIIHPEHPDADYPFKHLAGCGVAFKLATALLESLPTDCLDLVAIGTIADMVSLTGENR
VLVKNGLAMLKHTERVGLQELMSLSPIDLEHFNEDAIGFQIAPQLNALGRLDDPNPAIELLMGFDDQEAQAIALMIKKKN
EERKALVQDIFDQAMAMVDPQKPVQVLAQAGWHPGVLGIVAGRIMEAIGQTVIVLAIDNGFAKGSARSLEAINIFEALSG
NRDLFTAFGGHAGAAGVTLPVDNLEALSDLLCQFVIERGLDQTAKNTLTIDERLSLEDLSLDTLKSLDKLAPYGMDHPKP
IFYVKDIKVSQARTMGQDQSHLKFKVSQGKTSFDVLAFGQGSQLQDFQQATGLELAVTLSVNHWNGNTSLQLMLVDARVE
GVQLLDLRSKTAKLPEGIPTIEEDPNATVIVIKELPESFKDWRHQFADRTFDAIYFKNQIKHPYYLTGFGSREQFAKLYK
TIYQFPEFDVRHKLTDLSRYLNIDKLLLIKLIQIFEELAFVTIEDGLMTVNPQAQKRDISESRIYQELKELVKFQEIMAL
ASPQEMYDYLVNSKP

Nucleotide

• Length: 2208 bp

>NTDB_id=1020992 DQM52_RS06690 WP_015057673.1 1280912..1283119(-) (recJ) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC5371]
ATGATTAAATCCAAATATAGCTGGAAAATAAAAGACAAGAAGCCAGATGATGGCTTCTTTAAGCTAGCAAAGACAAAAGG
TCTAACCCAGACCGCCGCTCAGTTGATTTACGAGCGAGGGATAAGGACTGAAGAAGCCTTAGATGAGTTTTTAACAGCGG
ACTTGTCTCAACTGCATGATCCTTACTTGCTACATGACATGGCAAAAGCTGTGCCAAGAATTCGTCAAGCTATTGAAGAG
GGCGAACGAATTCTCATTTACGGCGACTATGATGCTGATGGCATGACGTCGGCTTCTATTGTCAAAGAAACCCTAGACAT
GATGGGAGCAGAGCCTTTGGTTTATCTTCCCAACCGCTTTACAGATGGCTATGGCCCCAACCAGAGCGTCTATAAATATT
TTATTGAGCAGGAAGCTGTGTCCCTAATTATCACGGTTGATAATGGCGTGGCCGGACATGAAGCGATTAGATATGCTCAA
GAACAGGAAGTTGATGTCATTGTAACTGACCATCATAGCCTGCCTGAAGAATTGCCAGAAGCCTTTGCCATCATTCATCC
TGAGCATCCTGATGCTGATTATCCCTTTAAACACTTAGCTGGCTGTGGCGTTGCCTTTAAATTGGCAACAGCTTTGCTAG
AAAGTTTACCAACAGACTGTCTAGACTTGGTAGCTATTGGAACCATTGCCGATATGGTAAGCTTGACAGGTGAAAACCGT
GTTTTAGTCAAAAATGGTCTGGCCATGCTCAAACACACCGAAAGAGTGGGCTTGCAGGAGTTGATGTCCTTGTCTCCTAT
TGATTTGGAACATTTTAATGAAGACGCCATTGGCTTTCAGATTGCTCCGCAATTAAATGCTTTAGGGCGCTTAGATGACC
CTAATCCAGCCATTGAGCTACTGATGGGCTTTGATGACCAAGAAGCTCAAGCGATTGCCTTGATGATTAAGAAAAAAAAT
GAAGAGCGTAAGGCTTTGGTCCAAGACATTTTTGATCAAGCGATGGCTATGGTTGATCCTCAAAAACCAGTTCAAGTCTT
AGCTCAAGCTGGTTGGCATCCAGGTGTGCTAGGTATTGTAGCGGGTCGCATTATGGAAGCCATTGGACAGACGGTCATTG
TCTTAGCTATTGATAACGGTTTTGCGAAAGGCTCGGCCAGAAGTTTAGAGGCCATTAATATATTTGAAGCCTTAAGTGGG
AATCGTGATCTTTTTACAGCTTTCGGTGGACATGCTGGTGCAGCTGGGGTGACTTTGCCCGTGGATAATTTAGAAGCTTT
ATCGGACTTGCTTTGTCAGTTTGTGATAGAACGTGGCTTAGATCAGACTGCTAAAAATACGTTAACTATTGATGAAAGGC
TGTCTTTGGAGGATCTTAGTCTTGATACTTTAAAGAGTTTGGACAAACTAGCCCCCTATGGGATGGATCATCCTAAGCCA
ATCTTTTATGTTAAGGATATTAAAGTTAGTCAAGCGCGTACCATGGGTCAAGACCAGAGTCATCTTAAATTCAAAGTCAG
CCAGGGTAAGACCTCCTTTGATGTTCTGGCTTTTGGTCAAGGAAGCCAACTACAAGACTTTCAACAAGCTACTGGTTTAG
AGTTAGCGGTAACTTTATCCGTCAACCACTGGAACGGCAATACCAGCCTCCAACTAATGTTGGTTGACGCTCGTGTTGAA
GGGGTGCAGTTGCTTGATTTACGGTCAAAAACAGCTAAACTACCCGAAGGTATTCCGACGATTGAGGAAGATCCCAATGC
AACAGTTATTGTTATTAAAGAGCTTCCAGAGTCTTTTAAAGACTGGCGTCATCAGTTCGCTGATAGAACCTTCGATGCCA
TTTATTTTAAAAATCAGATTAAACACCCCTATTACCTAACAGGTTTTGGAAGTCGTGAACAGTTTGCTAAACTCTATAAA
ACCATTTACCAATTTCCAGAATTTGATGTGCGTCATAAATTGACTGACTTGAGTCGCTACTTAAACATTGACAAACTTTT
ATTGATTAAGCTCATTCAGATTTTTGAAGAGCTAGCTTTTGTGACGATTGAAGATGGCCTGATGACAGTTAACCCACAAG
CGCAAAAGCGAGATATTTCTGAGAGTCGTATCTACCAAGAGCTAAAAGAACTCGTGAAGTTCCAAGAAATCATGGCCTTG
GCCAGTCCTCAAGAAATGTATGATTATTTGGTCAATTCGAAACCATAA

Domains

Predicted by InterProScan.

• DHH family (DHH) (83-228)

• Single-strand DNA-specific exonuclease, C terminal domain (ssDNA-exonuc_C) (588-729)

• RecJ OB domain (RecJ_OB) (450-556)

• DHHA1 domain (DHHA1) (317-435)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recJ	Streptococcus pneumoniae strain D39V	63.784	100	0.642
recJ	Bacillus subtilis subsp. subtilis str. 168	36.108	100	0.384