Detailed information NTG1020935

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: ABZ559_RS06915
• Genome accession: NZ_CP160400
• Coordinates: 1347215..1348444 (+)
• Length: 409 a.a.
• NCBI ID: WP_367005672.1
• Uniprot ID: -
• Organism: Streptococcus sp. ZY19097
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 1342215..1353444

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABZ559_RS06890 (ABZ559_06890)	-	1342696..1343985 (-)	1290	WP_367005670.1	hydroxymethylglutaryl-CoA reductase, degradative	-
ABZ559_RS06895 (ABZ559_06895)	-	1343966..1345138 (-)	1173	WP_018375400.1	hydroxymethylglutaryl-CoA synthase	-
ABZ559_RS06900 (ABZ559_06900)	-	1345575..1346414 (+)	840	WP_277290713.1	thymidylate synthase	-
ABZ559_RS06905 (ABZ559_06905)	-	1346518..1347012 (+)	495	WP_018375402.1	dihydrofolate reductase	-
ABZ559_RS06910 (ABZ559_06910)	-	1347024..1347194 (+)	171	WP_156812728.1	hypothetical protein	-
ABZ559_RS06915 (ABZ559_06915)	clpX	1347215..1348444 (+)	1230	WP_367005672.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
ABZ559_RS06920 (ABZ559_06920)	yihA	1348455..1349051 (+)	597	WP_277290715.1	ribosome biogenesis GTP-binding protein YihA/YsxC	-
ABZ559_RS06925 (ABZ559_06925)	-	1349375..1350751 (+)	1377	WP_367005673.1	amino acid permease	-
ABZ559_RS06930 (ABZ559_06930)	mmuM	1350761..1351711 (+)	951	WP_367005674.1	homocysteine S-methyltransferase	-

Sequence

Protein

• Length: 409 a.a.
• Molecular weight: 45078.58 Da
• Isoelectric Point: 4.5002

>NTDB_id=1020935 ABZ559_RS06915 WP_367005672.1 1347215..1348444(+) (clpX) [Streptococcus sp. ZY19097]
MAGNRTNDIKVHCSFCGKSQDEVRKIIAGNGVFICNECVTLSQEIIKEEMAEEVLADLAEVPKPKELLATLNEYVIGQDR
AKRALAVAVYNHYKRISFTESRDDSDVDLQKSNILMIGPTGSGKTFLAQTLAKSLNVPFAIADATSLTEAGYVGEDVENI
LLKLIQAADYNVERAERGIIYVDEIDKIAKKGENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPNQEMIQIDTK
NILFIVGGAFDGIEDIVKQRLGEKIIGFGQNNKKIDDDASYMQEIISEDIQKFGLIPEFIGRLPVVAALEQLTAEDLVRI
LTEPRNALVKQYQALLSYDGVDLEFDDDALIAIANKAIERKTGARGLRSIIEETMLDIMFEIPSQEEVTKVRITKEAVEG
KDKPILEIA

Nucleotide

• Length: 1230 bp

>NTDB_id=1020935 ABZ559_RS06915 WP_367005672.1 1347215..1348444(+) (clpX) [Streptococcus sp. ZY19097]
ATGGCTGGAAATCGAACTAACGATATTAAAGTACATTGCTCGTTTTGTGGAAAAAGTCAAGACGAGGTTAGAAAAATCAT
TGCGGGCAATGGTGTATTCATCTGTAATGAGTGCGTGACATTGTCCCAAGAAATAATAAAAGAAGAAATGGCAGAAGAAG
TTTTAGCAGATTTGGCCGAAGTTCCAAAACCAAAAGAATTACTGGCAACACTCAACGAATATGTTATTGGTCAAGATCGT
GCCAAACGTGCTCTTGCTGTCGCTGTTTACAATCATTATAAGCGCATCAGTTTTACTGAAAGTCGCGATGATAGTGATGT
TGATTTACAAAAATCAAACATTCTTATGATTGGCCCAACAGGTTCTGGCAAGACCTTCTTAGCACAAACCTTAGCTAAAA
GCCTTAACGTTCCATTTGCTATCGCAGATGCTACTTCATTGACCGAAGCTGGTTATGTGGGAGAGGATGTCGAAAATATC
CTTCTAAAACTTATTCAAGCGGCTGATTATAACGTTGAACGTGCTGAACGTGGAATCATTTACGTTGATGAAATTGATAA
AATCGCCAAAAAAGGTGAAAATGTATCTATCACGCGTGATGTTTCTGGCGAAGGAGTTCAGCAGGCTCTCTTAAAAATCA
TTGAGGGTACAGTTGCTAGCGTACCACCTCAAGGCGGCCGGAAACATCCAAATCAAGAAATGATTCAAATTGATACTAAA
AATATTCTTTTTATCGTCGGCGGTGCTTTTGATGGTATCGAAGACATTGTCAAGCAACGTTTGGGTGAGAAAATCATTGG
CTTTGGACAAAATAATAAAAAAATCGATGATGATGCGTCCTATATGCAGGAAATTATTTCAGAAGACATTCAAAAATTTG
GACTTATCCCCGAGTTTATCGGTCGCTTACCTGTTGTAGCAGCCCTTGAACAATTAACCGCTGAAGATTTAGTACGTATC
TTAACCGAGCCACGAAATGCTCTTGTTAAGCAATATCAGGCCCTCCTGTCATATGATGGTGTTGATCTTGAGTTTGACGA
CGATGCTTTGATTGCTATTGCAAATAAAGCGATTGAGCGTAAGACAGGTGCGCGTGGTCTTCGTTCGATCATTGAAGAAA
CCATGTTAGACATCATGTTTGAAATTCCTAGTCAGGAAGAAGTGACCAAAGTTCGTATTACAAAAGAAGCCGTTGAAGGT
AAAGATAAGCCAATTCTAGAAATTGCCTGA

Domains

Predicted by InterproScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (312-390)

• ClpX C4-type zinc finger (zf-C4_ClpX) (12-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (110-305)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	91.687	100	0.917
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	59.102	98.044	0.579