Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   ABZ559_RS03495 Genome accession   NZ_CP160400
Coordinates   687735..688736 (+) Length   333 a.a.
NCBI ID   WP_018376614.1    Uniprot ID   -
Organism   Streptococcus sp. ZY19097     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 682735..693736
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABZ559_RS03460 (ABZ559_03460) - 682916..683296 (+) 381 WP_367007245.1 PaaI family thioesterase -
  ABZ559_RS03465 (ABZ559_03465) - 683459..684385 (-) 927 WP_367007246.1 glycosyltransferase family 2 protein -
  ABZ559_RS03470 (ABZ559_03470) - 684671..685063 (-) 393 WP_367007247.1 VOC family protein -
  ABZ559_RS03475 (ABZ559_03475) - 685105..685785 (-) 681 WP_367007248.1 NAD(P)H-dependent oxidoreductase -
  ABZ559_RS03480 (ABZ559_03480) - 685803..685928 (-) 126 Protein_672 LysR family transcriptional regulator -
  ABZ559_RS03485 (ABZ559_03485) - 685928..686422 (-) 495 WP_317335409.1 NUDIX domain-containing protein -
  ABZ559_RS03490 (ABZ559_03490) - 686426..687511 (-) 1086 WP_367007249.1 Xaa-Pro peptidase family protein -
  ABZ559_RS03495 (ABZ559_03495) ccpA 687735..688736 (+) 1002 WP_018376614.1 catabolite control protein A Regulator
  ABZ559_RS03500 (ABZ559_03500) - 689008..690006 (+) 999 WP_367007250.1 glycosyltransferase -
  ABZ559_RS03505 (ABZ559_03505) - 690012..691346 (+) 1335 WP_367007251.1 glycosyltransferase family 4 protein -
  ABZ559_RS03510 (ABZ559_03510) - 691359..691748 (+) 390 WP_367007252.1 hypothetical protein -
  ABZ559_RS03515 (ABZ559_03515) - 692015..692332 (+) 318 WP_367007253.1 MazG-like protein -

Sequence


Protein


Download         Length: 333 a.a.        Molecular weight: 36664.71 Da        Isoelectric Point: 5.2887

>NTDB_id=1020925 ABZ559_RS03495 WP_018376614.1 687735..688736(+) (ccpA) [Streptococcus sp. ZY19097]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANSYFS
ILAKGIDDIAAMYKYNIVLASSDEDDDKEVNVVNTLFAKQVDGIIFMGHHLTDKIRAEFSRSRTPIVLAGTVDLDHQLPS
VNIDYKAAMTDVVDILAENHDKIAFVSGPLIDDINGKVRLVGYKEALKKNKIDFREGLVFEANYSYQEGYDLAQRVINSG
ATAAIVAEDELAAGLLNGLFAAGKKVPEDFEIFTSNDSPITQYTRPNLSSISQPVYDLGAVSMRMLTKIMGKEELEEKEI
LLNHGINRRGSTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=1020925 ABZ559_RS03495 WP_018376614.1 687735..688736(+) (ccpA) [Streptococcus sp. ZY19097]
ATGAATACTGATGATACCATTACGATTTACGATGTTGCCCGTGAAGCAGGAGTCTCTATGGCAACTGTTAGTCGAGTAGT
CAACGGTAATAAAAACGTCAAAGAAAACACACGAAAAAAAGTTTTGGAAGTGATTGATCGTCTAGATTATCGTCCAAATG
CTGTTGCCCGTGGTCTTGCCAGCAAGAAAACTACAACTGTTGGTGTTGTGATTCCAAATATTGCTAATAGCTACTTTTCA
ATCTTAGCTAAAGGAATTGATGATATTGCAGCTATGTATAAATACAATATTGTTCTTGCCTCAAGCGATGAGGATGACGA
CAAAGAAGTTAACGTAGTCAATACTTTGTTTGCAAAACAGGTTGATGGCATTATCTTCATGGGGCATCATCTCACGGATA
AAATTCGTGCTGAATTTTCACGTTCACGTACACCAATTGTTCTTGCTGGGACTGTTGACCTTGATCATCAATTACCAAGT
GTCAATATTGATTATAAAGCAGCAATGACTGATGTAGTTGATATTTTAGCTGAAAATCATGATAAGATTGCTTTTGTTTC
AGGACCTTTGATTGATGATATCAATGGCAAAGTTCGTCTCGTTGGCTATAAAGAAGCTCTCAAGAAAAATAAGATTGATT
TTAGAGAAGGTCTTGTTTTTGAAGCTAATTACAGTTACCAAGAGGGTTACGATCTTGCACAGCGTGTGATTAATTCTGGT
GCAACCGCGGCTATTGTTGCAGAAGATGAGTTGGCAGCAGGCTTGTTGAATGGTCTCTTTGCAGCAGGCAAGAAAGTTCC
GGAAGATTTTGAAATTTTCACTAGCAACGATTCGCCAATTACACAGTACACGCGTCCAAATCTGAGTTCAATTAGCCAAC
CTGTCTATGACTTGGGAGCTGTTAGCATGCGTATGCTGACAAAAATTATGGGCAAAGAAGAGTTAGAGGAAAAAGAAATT
TTGCTTAACCACGGAATTAATCGCCGAGGTTCTACAAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

78.979

100

0.79

  ccpA Streptococcus pneumoniae D39

78.078

100

0.781

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

57.402

99.399

0.571


Multiple sequence alignment