Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | AB1F75_RS08565 | Genome accession | NZ_CP160396 |
| Coordinates | 1642168..1643205 (+) | Length | 345 a.a. |
| NCBI ID | WP_044052501.1 | Uniprot ID | - |
| Organism | Bacillus subtilis subsp. subtilis strain BSP1 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1637168..1648205
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB1F75_RS08540 (AB1F75_08540) | rsbRD | 1637385..1638221 (+) | 837 | WP_003230149.1 | RsbT co-antagonist protein RsbRD | - |
| AB1F75_RS08545 (AB1F75_08545) | yqhB | 1638274..1639602 (-) | 1329 | WP_015251711.1 | hemolysin family protein | - |
| AB1F75_RS08550 (AB1F75_08550) | corA | 1639745..1640698 (+) | 954 | WP_004399136.1 | magnesium transporter CorA | - |
| AB1F75_RS08555 (AB1F75_08555) | - | 1640700..1640897 (+) | 198 | WP_014480259.1 | CBS domain-containing protein | - |
| AB1F75_RS08560 (AB1F75_08560) | comGA | 1641111..1642181 (+) | 1071 | WP_004399124.1 | competence protein ComGA | Machinery gene |
| AB1F75_RS08565 (AB1F75_08565) | comGB | 1642168..1643205 (+) | 1038 | WP_044052501.1 | comG operon protein ComGB | Machinery gene |
| AB1F75_RS08570 (AB1F75_08570) | comGC | 1643219..1643515 (+) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| AB1F75_RS08575 (AB1F75_08575) | comGD | 1643505..1643936 (+) | 432 | WP_004398628.1 | comG operon protein ComGD | Machinery gene |
| AB1F75_RS08580 (AB1F75_08580) | comGE | 1643920..1644267 (+) | 348 | WP_003230165.1 | ComG operon protein 5 | Machinery gene |
| AB1F75_RS08585 (AB1F75_08585) | comGF | 1644293..1644676 (+) | 384 | WP_015251713.1 | ComG operon protein ComGF | Machinery gene |
| AB1F75_RS08590 (AB1F75_08590) | comGG | 1644677..1645051 (+) | 375 | WP_015251714.1 | ComG operon protein ComGG | Machinery gene |
| AB1F75_RS08595 (AB1F75_08595) | spoIITA | 1645122..1645302 (+) | 181 | Protein_1684 | YqzE family protein | - |
| AB1F75_RS08600 (AB1F75_08600) | yqzG | 1645344..1645670 (-) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| AB1F75_RS08605 (AB1F75_08605) | tapA | 1645942..1646703 (+) | 762 | WP_015251716.1 | amyloid fiber anchoring/assembly protein TapA | - |
| AB1F75_RS08610 (AB1F75_08610) | sipW | 1646687..1647259 (+) | 573 | WP_003246088.1 | signal peptidase I SipW | - |
| AB1F75_RS08615 (AB1F75_08615) | tasA | 1647323..1648108 (+) | 786 | WP_015251717.1 | biofilm matrix protein TasA | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39746.21 Da Isoelectric Point: 9.6257
>NTDB_id=1020803 AB1F75_RS08565 WP_044052501.1 1642168..1643205(+) (comGB) [Bacillus subtilis subsp. subtilis strain BSP1]
MKKIRKVWLLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
MKKIRKVWLLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=1020803 AB1F75_RS08565 WP_044052501.1 1642168..1643205(+) (comGB) [Bacillus subtilis subsp. subtilis strain BSP1]
ATGAAAAAGATTAGAAAAGTCTGGTTGTTAAAGGATCAAGCCAGGTTATTAAAGAGGCTTGGTGAAATGACTGCGGGCGG
ATATACACTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCAATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTAAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTTGTTAAAGGATCAAGCCAGGTTATTAAAGAGGCTTGGTGAAATGACTGCGGGCGG
ATATACACTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCAATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTAAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
99.69 |
93.623 |
0.933 |