Detailed information NTG1020798

Bioinformatically predicted

Overview

• Name: comEA
• Type: Machinery gene
• Locus tag: AB1F75_RS08110
• Genome accession: NZ_CP160396
• Coordinates: 1560050..1560667 (+)
• Length: 205 a.a.
• NCBI ID: WP_004398514.1
• Uniprot ID: A0AAE2SLR2
• Organism: Bacillus subtilis subsp. subtilis strain BSP1
• Function: dsDNA binding to the cell surface (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1555050..1565667

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB1F75_RS08075 (AB1F75_08075)	aroE	1555708..1556550 (+)	843	WP_003229967.1	shikimate dehydrogenase	-
AB1F75_RS08080 (AB1F75_08080)	yhbY	1556544..1556834 (+)	291	WP_003226133.1	ribosome assembly RNA-binding protein YhbY	-
AB1F75_RS08085 (AB1F75_08085)	nadD	1556846..1557415 (+)	570	WP_004398676.1	nicotinate-nucleotide adenylyltransferase	-
AB1F75_RS08090 (AB1F75_08090)	yqeK	1557405..1557965 (+)	561	WP_004399059.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
AB1F75_RS08095 (AB1F75_08095)	rsfS	1557983..1558339 (+)	357	WP_003229971.1	ribosome silencing factor	-
AB1F75_RS08100 (AB1F75_08100)	yqeM	1558336..1559079 (+)	744	WP_003229973.1	class I SAM-dependent methyltransferase	-
AB1F75_RS08105 (AB1F75_08105)	comER	1559145..1559966 (-)	822	WP_004398597.1	late competence protein ComER	-
AB1F75_RS08110 (AB1F75_08110)	comEA	1560050..1560667 (+)	618	WP_004398514.1	competence protein ComEA	Machinery gene
AB1F75_RS08115 (AB1F75_08115)	comEB	1560734..1561303 (+)	570	WP_003229978.1	ComE operon protein 2	-
AB1F75_RS08120 (AB1F75_08120)	comEC	1561307..1563637 (+)	2331	WP_015251673.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
AB1F75_RS08125 (AB1F75_08125)	yqzM	1563677..1563811 (-)	135	WP_003229983.1	YqzM family protein	-
AB1F75_RS08130 (AB1F75_08130)	-	1563852..1564001 (+)	150	WP_003229985.1	hypothetical protein	-
AB1F75_RS08135 (AB1F75_08135)	holA	1564041..1565084 (+)	1044	WP_015251674.1	DNA polymerase III subunit delta	-
AB1F75_RS08140 (AB1F75_08140)	rpsT	1565099..1565365 (-)	267	WP_003229989.1	30S ribosomal protein S20	-

Sequence

Protein

• Length: 205 a.a.
• Molecular weight: 21769.45 Da
• Isoelectric Point: 4.7220

>NTDB_id=1020798 AB1F75_RS08110 WP_004398514.1 1560050..1560667(+) (comEA) [Bacillus subtilis subsp. subtilis strain BSP1]
MNWLNQHKKAIILAASAAVFTAIMIFLATGKNKEPVKQAVPTETENTVVKQEANNDESNETIVIDIKGAVQHPGVYEMRT
GDRVSQAIEKAGGTSEQADEAQVNLAEILQDGTVVYIPKKGEETAVQQGGGGSVQSDGGKGALVNINTATLEELQGISGV
GPSKAEAIIAYREENGRFQTIEDITKVSGIGEKSFEKIKSSITVK

Nucleotide

• Length: 618 bp

>NTDB_id=1020798 AB1F75_RS08110 WP_004398514.1 1560050..1560667(+) (comEA) [Bacillus subtilis subsp. subtilis strain BSP1]
ATGAATTGGTTGAATCAGCATAAGAAAGCAATTATTTTAGCGGCTTCTGCGGCTGTTTTCACAGCGATTATGATCTTTCT
GGCCACAGGGAAAAATAAAGAGCCGGTGAAGCAAGCTGTACCAACAGAGACAGAAAATACAGTGGTAAAGCAGGAAGCAA
ACAACGACGAGTCAAACGAAACAATTGTGATAGACATCAAAGGTGCTGTTCAGCATCCTGGCGTTTATGAAATGCGAACA
GGGGACAGAGTATCTCAGGCAATTGAGAAAGCGGGCGGGACCAGTGAACAAGCAGACGAAGCGCAAGTAAATTTGGCGGA
GATTCTGCAGGACGGGACAGTGGTGTACATCCCGAAAAAGGGAGAGGAAACAGCAGTGCAGCAAGGTGGCGGAGGGTCTG
TCCAAAGCGATGGAGGGAAGGGAGCGCTGGTGAATATCAATACAGCAACCTTAGAGGAGTTACAAGGCATCTCAGGGGTG
GGGCCATCCAAAGCTGAAGCTATTATTGCATACCGGGAGGAAAACGGTCGTTTCCAAACAATTGAAGATATCACTAAGGT
TTCAGGAATAGGTGAAAAGTCATTTGAGAAAATAAAGTCTTCCATTACAGTAAAGTGA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix motif (HHH_3) (142-203)

• SLBB domain (SLBB) (63-118)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
comEA	Staphylococcus aureus MW2	37.273	100	0.4
comEA	Staphylococcus aureus N315	36.364	100	0.39