Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   AB1F75_RS01885 Genome accession   NZ_CP160396
Coordinates   359551..359670 (-) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus subtilis subsp. subtilis strain BSP1     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 354551..364670
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB1F75_RS01865 (AB1F75_01865) pbpG 354922..356996 (-) 2075 Protein_368 transglycosylase domain-containing protein -
  AB1F75_RS01870 (AB1F75_01870) speE 357198..358028 (+) 831 WP_003227543.1 spermidine synthase -
  AB1F75_RS01875 (AB1F75_01875) speB 358089..358961 (+) 873 WP_015250983.1 agmatinase -
  AB1F75_RS01880 (AB1F75_01880) ywhH 358993..359455 (-) 463 Protein_371 YbaK/EbsC family protein -
  AB1F75_RS01885 (AB1F75_01885) phrF 359551..359670 (-) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  AB1F75_RS01890 (AB1F75_01890) rapF 359654..360799 (-) 1146 WP_015250985.1 response regulator aspartate phosphatase RapF Regulator
  AB1F75_RS01895 (AB1F75_01895) ywhK 361029..362384 (+) 1356 WP_015250986.1 YncE family protein -
  AB1F75_RS01900 (AB1F75_01900) ywhL 362423..363799 (+) 1377 WP_015250987.1 YncE family protein -
  AB1F75_RS01905 (AB1F75_01905) albG 363805..364506 (-) 702 WP_015250988.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=1020773 AB1F75_RS01885 WP_009968329.1 359551..359670(-) (phrF) [Bacillus subtilis subsp. subtilis strain BSP1]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=1020773 AB1F75_RS01885 WP_009968329.1 359551..359670(-) (phrF) [Bacillus subtilis subsp. subtilis strain BSP1]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment