Detailed information NTG1020774

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: AB1F75_RS01890
• Genome accession: NZ_CP160396
• Coordinates: 359654..360799 (-)
• Length: 381 a.a.
• NCBI ID: WP_015250985.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis strain BSP1
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 354654..365799

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB1F75_RS01865 (AB1F75_01865)	pbpG	354922..356996 (-)	2075	Protein_368	transglycosylase domain-containing protein	-
AB1F75_RS01870 (AB1F75_01870)	speE	357198..358028 (+)	831	WP_003227543.1	spermidine synthase	-
AB1F75_RS01875 (AB1F75_01875)	speB	358089..358961 (+)	873	WP_015250983.1	agmatinase	-
AB1F75_RS01880 (AB1F75_01880)	ywhH	358993..359455 (-)	463	Protein_371	YbaK/EbsC family protein	-
AB1F75_RS01885 (AB1F75_01885)	phrF	359551..359670 (-)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
AB1F75_RS01890 (AB1F75_01890)	rapF	359654..360799 (-)	1146	WP_015250985.1	response regulator aspartate phosphatase RapF	Regulator
AB1F75_RS01895 (AB1F75_01895)	ywhK	361029..362384 (+)	1356	WP_015250986.1	YncE family protein	-
AB1F75_RS01900 (AB1F75_01900)	ywhL	362423..363799 (+)	1377	WP_015250987.1	YncE family protein	-
AB1F75_RS01905 (AB1F75_01905)	albG	363805..364506 (-)	702	WP_015250988.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
AB1F75_RS01910 (AB1F75_01910)	albF	364503..365783 (-)	1281	WP_015250989.1	pitrilysin family protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45590.06 Da
• Isoelectric Point: 5.0624

>NTDB_id=1020774 AB1F75_RS01890 WP_015250985.1 359654..360799(-) (rapF) [Bacillus subtilis subsp. subtilis strain BSP1]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKENEAYNIRLLQCHSLFATNFLDLKQYEDAVSHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=1020774 AB1F75_RS01890 WP_015250985.1 359654..360799(-) (rapF) [Bacillus subtilis subsp. subtilis strain BSP1]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTTAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTGATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTATGAGCTGGATCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAAAATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCGTCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGAAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGGCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-207)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	99.213	100	0.992
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572