Detailed information NTG1020013

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: AB0R65_RS17045
• Genome accession: NZ_CP160225
• Coordinates: 3439218..3440381 (-)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus velezensis strain JJ1284
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3434218..3445381

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB0R65_RS17015 (AB0R65_17015)	-	3434482..3434901 (-)	420	WP_012118571.1	TIGR03826 family flagellar region protein	-
AB0R65_RS17020 (AB0R65_17020)	comFC	3434975..3435664 (-)	690	WP_197061611.1	phosphoribosyltransferase family protein	Machinery gene
AB0R65_RS17025 (AB0R65_17025)	-	3435670..3435954 (-)	285	WP_007407481.1	competence protein ComFB	-
AB0R65_RS17030 (AB0R65_17030)	comFA	3436012..3437397 (-)	1386	WP_167340893.1	DEAD/DEAH box helicase	Machinery gene
AB0R65_RS17035 (AB0R65_17035)	-	3437506..3438354 (-)	849	WP_044801920.1	DegV family protein	-
AB0R65_RS17040 (AB0R65_17040)	degU	3438452..3439141 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
AB0R65_RS17045 (AB0R65_17045)	degS	3439218..3440381 (-)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
AB0R65_RS17050 (AB0R65_17050)	-	3440604..3441251 (+)	648	WP_007614107.1	YigZ family protein	-
AB0R65_RS17055 (AB0R65_17055)	-	3441256..3442476 (+)	1221	WP_105937243.1	LCP family protein	-
AB0R65_RS17060 (AB0R65_17060)	-	3442575..3443651 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
AB0R65_RS17065 (AB0R65_17065)	-	3443784..3444980 (-)	1197	WP_167340894.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=1020013 AB0R65_RS17045 WP_007407484.1 3439218..3440381(-) (degS) [Bacillus velezensis strain JJ1284]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=1020013 AB0R65_RS17045 WP_007407484.1 3439218..3440381(-) (degS) [Bacillus velezensis strain JJ1284]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTAGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTACGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGCATCGGAGACACAGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAATGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951