Detailed information NTG0102000

Bioinformatically predicted

Overview

• Name: ccpA
• Type: Regulator
• Locus tag: BAMY6614_RS16925
• Genome accession: NZ_CP006960
• Coordinates: 3561209..3562213 (-)
• Length: 334 a.a.
• NCBI ID: WP_003152385.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens UMAF6614
• Function: regulate comCDE transcription and transformation (predicted from homology) Competence regulation

Genomic Context

Location: 3556209..3567213

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BAMY6614_RS16900 (BAMY6614_17895)	-	3557172..3557804 (+)	633	WP_061862487.1	GNAT family N-acetyltransferase	-
BAMY6614_RS16905 (BAMY6614_17900)	-	3557829..3558473 (+)	645	WP_061862488.1	acetoin utilization AcuB family protein	-
BAMY6614_RS16910 (BAMY6614_17905)	-	3558470..3559636 (+)	1167	WP_021494463.1	acetoin utilization protein AcuC	-
BAMY6614_RS16915 (BAMY6614_17910)	motS	3559646..3560335 (-)	690	WP_003152387.1	flagellar motor protein MotS	-
BAMY6614_RS16920 (BAMY6614_17915)	motP	3560325..3561140 (-)	816	WP_007408775.1	flagellar motor protein MotP	-
BAMY6614_RS16925 (BAMY6614_17920)	ccpA	3561209..3562213 (-)	1005	WP_003152385.1	catabolite control protein A	Regulator
BAMY6614_RS16930 (BAMY6614_17925)	-	3562492..3563568 (-)	1077	WP_003152383.1	bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase	-
BAMY6614_RS16935 (BAMY6614_17930)	ytxJ	3563804..3564130 (-)	327	WP_061862489.1	bacillithiol system redox-active protein YtxJ	-
BAMY6614_RS16940 (BAMY6614_17935)	-	3564156..3564569 (-)	414	WP_003152380.1	YtxH domain-containing protein	-
BAMY6614_RS16945 (BAMY6614_17940)	-	3564602..3565024 (-)	423	WP_007408777.1	DUF948 domain-containing protein	-
BAMY6614_RS16950 (BAMY6614_17945)	murC	3565180..3566478 (-)	1299	WP_061862490.1	UDP-N-acetylmuramate--L-alanine ligase	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36963.29 Da
• Isoelectric Point: 4.9206

>NTDB_id=102000 BAMY6614_RS16925 WP_003152385.1 3561209..3562213(-) (ccpA) [Bacillus amyloliquefaciens UMAF6614]
MSNITIYDVAREANVSMATVSRVVNGNPNVKPTTRKKVLEAIDRLGYRPNAVARGLASKKTTTVGVIIPDISSIFYSELA
RGIEDIATMYKYNIILSNSDQNLEKELHLLNTMLGKQVDGIVFMGGNITDEHVEEFKRSPVPIVLAASVEEQGETPSVAI
DYEQAIYDAVKLFIDKGHRDIAFVSGPMQEPINRSKKLQGYKRALEEAAIPFNEQFVAEGDYTYDSGMEALQSLMGLDRK
PTAILSATDEMALGIIHAAQDQGLSIPDDLDIIGFDNTRLSLMVRPQLSTVVQPTYDIGAVAMRLLTKLMNKEPVEEHIV
ELPHRIELRQSTKS

Nucleotide

• Length: 1005 bp

>NTDB_id=102000 BAMY6614_RS16925 WP_003152385.1 3561209..3562213(-) (ccpA) [Bacillus amyloliquefaciens UMAF6614]
GTGAGCAACATTACGATATACGATGTGGCCAGAGAAGCAAATGTCAGTATGGCAACTGTTTCCCGCGTCGTGAACGGCAA
CCCGAATGTAAAACCGACGACCAGAAAAAAAGTATTGGAAGCCATTGACCGGCTCGGCTACCGCCCGAACGCGGTGGCAA
GAGGGCTTGCAAGCAAAAAAACGACAACGGTCGGCGTCATCATCCCTGATATCTCAAGCATTTTCTACTCGGAACTTGCG
CGTGGAATTGAAGATATCGCGACGATGTACAAATATAATATTATTTTAAGCAACTCGGACCAAAATCTTGAGAAAGAACT
GCATCTGTTAAATACGATGCTCGGCAAACAAGTGGACGGTATCGTATTTATGGGCGGCAACATTACGGACGAGCATGTCG
AAGAATTTAAGCGCTCTCCTGTGCCGATCGTCTTGGCGGCATCAGTGGAAGAACAGGGCGAGACGCCTTCTGTCGCTATT
GATTATGAACAGGCGATTTATGATGCCGTTAAGCTTTTCATTGATAAAGGGCATCGCGATATCGCATTCGTCTCCGGACC
GATGCAAGAGCCGATCAACCGTTCGAAAAAACTGCAAGGGTACAAACGGGCGCTTGAAGAAGCGGCGATTCCGTTTAACG
AGCAATTCGTAGCGGAAGGCGATTACACCTATGATTCCGGTATGGAGGCGCTTCAAAGCTTGATGGGCCTTGACCGGAAA
CCGACGGCGATTCTTTCTGCGACGGATGAAATGGCCCTCGGCATTATCCATGCGGCCCAAGATCAAGGTCTTTCGATTCC
TGATGATCTTGATATTATCGGTTTTGACAATACGAGATTGAGCCTGATGGTCCGCCCTCAGCTTTCAACAGTCGTGCAGC
CTACGTACGATATCGGCGCCGTGGCGATGAGACTTTTGACAAAACTGATGAACAAAGAGCCGGTTGAAGAGCATATCGTC
GAATTGCCTCACCGCATCGAATTAAGACAATCAACCAAGTCATAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (5-50)

• Periplasmic binding protein-like domain (Peripla_BP_3) (171-332)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ccpA	Streptococcus pneumoniae D39	54.242	98.802	0.536
ccpA	Streptococcus gordonii str. Challis substr. CH1	53.333	98.802	0.527
ccpA	Lactococcus lactis subsp. lactis strain DGCC12653	50.602	99.401	0.503