Detailed information NTG0101991

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: BAMY6614_RS15870
• Genome accession: NZ_CP006960
• Coordinates: 3342866..3343471 (-)
• Length: 201 a.a.
• NCBI ID: WP_003152683.1
• Uniprot ID: A7Z769
• Organism: Bacillus amyloliquefaciens UMAF6614
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3337866..3348471

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BAMY6614_RS15835 (BAMY6614_16735)	-	3337877..3338533 (-)	657	WP_014418533.1	DUF421 domain-containing protein	-
BAMY6614_RS15840 (BAMY6614_16740)	-	3338701..3339087 (+)	387	WP_003152697.1	TIGR04086 family membrane protein	-
BAMY6614_RS15845 (BAMY6614_16745)	yajC	3339140..3339400 (-)	261	WP_061862434.1	preprotein translocase subunit YajC	-
BAMY6614_RS15850 (BAMY6614_16750)	tgt	3339431..3340576 (-)	1146	WP_014305500.1	tRNA guanosine(34) transglycosylase Tgt	-
BAMY6614_RS15855 (BAMY6614_16755)	queA	3340604..3341632 (-)	1029	WP_003152692.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
BAMY6614_RS15860 (BAMY6614_16760)	-	3341658..3341858 (-)	201	WP_003152687.1	DUF2905 domain-containing protein	-
BAMY6614_RS15865 (BAMY6614_16765)	ruvB	3341851..3342855 (-)	1005	WP_003152685.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
BAMY6614_RS15870 (BAMY6614_16770)	ruvA	3342866..3343471 (-)	606	WP_003152683.1	Holliday junction branch migration protein RuvA	Machinery gene
BAMY6614_RS15875 (BAMY6614_16775)	-	3343606..3344115 (-)	510	WP_012118093.1	intercompartmental signaling factor BofC	-
BAMY6614_RS20730 (BAMY6614_16780)	-	3344248..3344367 (-)	120	WP_370531142.1	hypothetical protein	-
BAMY6614_RS15885 (BAMY6614_16785)	-	3344500..3345093 (-)	594	WP_007612851.1	YhcN/YlaJ family sporulation lipoprotein	-
BAMY6614_RS15890 (BAMY6614_16790)	safA	3345241..3346431 (-)	1191	WP_061862436.1	SafA/ExsA family spore coat assembly protein	-
BAMY6614_RS15895 (BAMY6614_16795)	nadA	3346559..3347662 (-)	1104	WP_061862437.1	quinolinate synthase NadA	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22414.85 Da
• Isoelectric Point: 5.1597

>NTDB_id=101991 BAMY6614_RS15870 WP_003152683.1 3342866..3343471(-) (ruvA) [Bacillus amyloliquefaciens UMAF6614]
MIEFVKGTIDYVSPQYIVIENGGIGYQVFTPNPFIYKVSNQETIFTYHHIKEDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIEAIEQEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIDNLFNHEARIEKQEAETALDEAL
EALRVLGYAEKEIKKVLPHLKEETALSTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=101991 BAMY6614_RS15870 WP_003152683.1 3342866..3343471(-) (ruvA) [Bacillus amyloliquefaciens UMAF6614]
GTGATTGAATTCGTGAAGGGGACGATTGATTACGTATCTCCCCAATACATCGTGATTGAAAACGGCGGAATCGGCTATCA
GGTCTTCACTCCGAATCCGTTTATTTATAAGGTAAGCAATCAAGAGACCATTTTTACGTATCATCATATAAAAGAAGACG
CCTTTTCTTTGTACGGTTTTTCAACCCGGGAAGAAAAAGCGCTTTTCACAAAGCTGCTGAACGTCACCGGCATCGGGCCT
AAAGGGGCGCTCGCCATCCTCGGTTCCGGTGATCCCGGAGCCGTCATCGAAGCGATCGAACAGGAAGATGAAGCCTTTTT
GGTGAAATTTCCGGGTGTGGGCAAAAAAACGGCGCGGCAGATTATTCTTGATTTGAAAGGCAAACTGGCCGACGTCGTGC
CTGAAATGATTGACAACCTGTTCAATCATGAAGCGCGCATTGAAAAACAAGAGGCTGAAACGGCGCTTGACGAGGCGCTT
GAAGCGCTCCGGGTTCTCGGCTACGCCGAAAAAGAAATTAAAAAAGTGCTTCCTCACTTAAAAGAGGAAACGGCGCTTTC
AACAGATCAATATGTGAAAAAAGCATTGCAAAAATTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: A7Z769

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	92.537	100	0.925
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408