Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   AB0R82_RS16165 Genome accession   NZ_CP160220
Coordinates   3115553..3117865 (-) Length   770 a.a.
NCBI ID   WP_077671126.1    Uniprot ID   -
Organism   Bacillus subtilis strain JM553     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3110553..3122865
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB0R82_RS16125 (AB0R82_16125) mrpB 3111020..3111451 (+) 432 WP_003228819.1 Na(+)/H(+) antiporter subunit B -
  AB0R82_RS16130 (AB0R82_16130) mrpC 3111451..3111792 (+) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  AB0R82_RS16135 (AB0R82_16135) mrpD 3111785..3113266 (+) 1482 WP_204551362.1 Na+/H+ antiporter subunit D -
  AB0R82_RS16140 (AB0R82_16140) mrpE 3113272..3113748 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  AB0R82_RS16145 (AB0R82_16145) mrpF 3113748..3114032 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  AB0R82_RS16150 (AB0R82_16150) mnhG 3114016..3114390 (+) 375 WP_015714623.1 monovalent cation/H(+) antiporter subunit G -
  AB0R82_RS16155 (AB0R82_16155) yuxO 3114429..3114809 (-) 381 WP_014477831.1 hotdog fold thioesterase -
  AB0R82_RS16160 (AB0R82_16160) comA 3114828..3115472 (-) 645 WP_366591747.1 two-component system response regulator ComA Regulator
  AB0R82_RS16165 (AB0R82_16165) comP 3115553..3117865 (-) 2313 WP_077671126.1 histidine kinase Regulator
  AB0R82_RS16170 (AB0R82_16170) comX 3117881..3118102 (-) 222 WP_014480704.1 competence pheromone ComX -
  AB0R82_RS16175 (AB0R82_16175) - 3118104..3118967 (-) 864 WP_043858576.1 polyprenyl synthetase family protein -
  AB0R82_RS16180 (AB0R82_16180) degQ 3119152..3119292 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  AB0R82_RS16185 (AB0R82_16185) - 3119514..3119639 (+) 126 WP_121549029.1 hypothetical protein -
  AB0R82_RS16190 (AB0R82_16190) - 3119754..3120122 (+) 369 WP_038427878.1 hypothetical protein -
  AB0R82_RS16195 (AB0R82_16195) pdeH 3120098..3121327 (-) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -

Sequence


Protein


Download         Length: 770 a.a.        Molecular weight: 89540.78 Da        Isoelectric Point: 8.4292

>NTDB_id=1019718 AB0R82_RS16165 WP_077671126.1 3115553..3117865(-) (comP) [Bacillus subtilis strain JM553]
MYRYINVYKYLSLVFIILSFIYVIYLSYSFAFNIFVGADVKINEQGKLEVTNVLDYTDEYYSGVKKGDIILEVNGEKGSD
IQLKSGRLVNVESLIVERDNKSFHLQNVSLISEENLFMYLIPVISYSICLFCIFFIYRINKVRKSTSAYILILFLLFVSV
AYVSACGARRGEEISTYLLVLTLVSCPVLYIHFIYKYFIELGTKLFEKKILIIMYMLPLINLLLEDVLSNRLKSSAFLSN
LNLISFFVLVLTVSILIHKGIRKFKQKEQKSILKVLAYTNIFSFSPFIVFFAVPYVFLEKYVSPFSLAAFTLVIPFSLVY
QFMTNRLYNIDFVVGRLKYYGFLAITPTIIVVTIFNYIQQPKDIFYLVKLTIAIYVLMFAVFYFKEIIDFRFKLKRFTEK
FNYQDGIFKFTQLIKQASSVDQVLNHFKNTILDVLNIDNACVYDNSKGEITLLSKNNFKDLTYKNHEQYVKNFTGDIGKI
KEFKQGFIIKIGERGDKSFLVLCFSSYNTFKLTRDEIAWLQTLAFYTNVSLENVMKIEELMVHLEDLKQQESNPVWLKKL
MYTIEEKQRSDLARDLHDSVLQDLISLKRQCELFLGDFKKGDNPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLY
DLGLVKALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYEDD
GVGFDQEKNTEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2313 bp        

>NTDB_id=1019718 AB0R82_RS16165 WP_077671126.1 3115553..3117865(-) (comP) [Bacillus subtilis strain JM553]
ATGTACAGATATATTAACGTCTATAAATATTTGTCTCTAGTTTTTATCATTTTAAGTTTTATTTATGTTATATACCTCTC
GTATAGCTTTGCTTTTAACATCTTCGTAGGTGCGGATGTAAAGATAAATGAACAGGGTAAGTTAGAGGTCACTAATGTTT
TAGATTATACAGATGAATATTATTCAGGTGTGAAAAAGGGAGATATCATTCTTGAAGTAAATGGGGAGAAAGGCAGTGAT
ATTCAATTAAAAAGTGGAAGATTGGTCAATGTAGAAAGTTTAATTGTTGAGAGAGATAATAAATCATTTCATTTACAAAA
TGTAAGCCTAATCAGTGAAGAAAATTTATTTATGTATCTCATTCCTGTAATATCTTATTCAATCTGTTTATTTTGTATAT
TTTTTATTTATAGAATAAATAAAGTAAGAAAATCAACTTCTGCTTATATTTTAATATTATTTTTGTTATTTGTATCAGTA
GCGTATGTAAGTGCATGCGGGGCAAGAAGAGGTGAAGAGATAAGCACTTACCTGCTTGTTCTTACTTTAGTCAGCTGTCC
GGTGTTATATATTCATTTTATATATAAATACTTTATAGAATTAGGAACAAAGTTATTCGAAAAGAAGATTTTAATCATTA
TGTATATGCTCCCGCTAATAAATCTTTTATTAGAGGACGTTCTGAGTAATAGATTAAAATCTTCGGCTTTTTTGTCTAAT
CTGAATTTGATTTCATTTTTTGTCCTAGTTCTTACTGTATCGATTCTTATCCATAAAGGGATAAGAAAATTTAAACAAAA
AGAGCAAAAGTCAATTTTGAAAGTCCTTGCTTATACAAATATCTTTTCTTTCAGTCCGTTTATTGTCTTTTTTGCTGTTC
CATATGTGTTTTTGGAGAAGTATGTCTCACCTTTTAGTTTGGCTGCTTTTACACTTGTTATACCTTTTTCTTTAGTATAT
CAATTTATGACTAATAGACTTTATAATATCGACTTTGTTGTGGGGCGGCTTAAGTACTACGGTTTTTTAGCCATTACACC
TACTATTATCGTAGTGACCATCTTTAATTACATTCAGCAACCAAAGGATATCTTTTATTTAGTTAAACTAACAATTGCAA
TATATGTGCTTATGTTTGCCGTTTTTTACTTTAAAGAGATTATTGACTTTCGTTTCAAGTTAAAAAGATTTACTGAAAAA
TTTAATTATCAAGATGGGATTTTTAAATTTACTCAATTAATAAAGCAAGCATCATCAGTAGATCAAGTACTTAATCACTT
TAAGAATACAATCTTAGATGTATTAAATATAGATAATGCTTGTGTGTATGATAATTCAAAAGGAGAAATTACTCTCCTTA
GCAAGAATAACTTTAAAGATCTCACTTATAAAAATCATGAGCAATATGTGAAAAATTTTACTGGTGATATCGGCAAAATT
AAAGAGTTTAAACAAGGTTTTATTATTAAAATAGGTGAACGAGGAGACAAATCATTTTTAGTACTCTGTTTCTCAAGTTA
TAATACTTTTAAATTAACAAGAGATGAAATTGCATGGCTTCAAACATTAGCGTTTTATACAAATGTTTCATTGGAAAACG
TGATGAAAATAGAGGAATTGATGGTGCATCTTGAGGATTTAAAACAACAAGAATCCAACCCCGTATGGCTCAAAAAACTT
ATGTATACGATCGAGGAAAAACAACGCTCTGATCTCGCCCGCGATCTCCACGATTCGGTTCTTCAGGATTTGATTTCCTT
AAAACGCCAGTGTGAGCTGTTTTTGGGTGATTTTAAGAAGGGTGATAATCCGTGCCGTGAAGAGGTGCAGGACAAGCTTG
TACAGATGAATGAGCAGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAGCTGCGGCCGCAGCTTCTGTAT
GATCTTGGATTAGTGAAGGCGCTGTCGAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCACATTCGTTTAAATAC
CGGGAGATTTACGGCTTCCCTTGATCTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTCTGTCTAATGCGG
TCAAGCACTCTCAGGCGACGGATGTGCTGATTATGCTCATCAGTATTCAAAACAAAATCGTTCTTCATTATGAGGACGAT
GGCGTTGGGTTTGATCAGGAAAAGAATACTGAGCATTCCATGAGCATGGGGCTTTCTGGCATTAAGGAGAGAGTCAGGGC
TTTAGATGGGCGCCTTCGGATTGAAACAAGTGAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

56.307

99.87

0.562


Multiple sequence alignment