Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   AB0R82_RS02150 Genome accession   NZ_CP160220
Coordinates   421903..422853 (+) Length   316 a.a.
NCBI ID   WP_088325307.1    Uniprot ID   -
Organism   Bacillus subtilis strain JM553     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 416903..427853
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB0R82_RS02125 (AB0R82_02125) rapC 418363..419511 (+) 1149 WP_366592180.1 response regulator aspartate phosphatase RapC Regulator
  AB0R82_RS02130 (AB0R82_02130) phrC 419495..419617 (+) 123 WP_198878977.1 phosphatase RapC inhibitor PhrC Regulator
  AB0R82_RS02135 (AB0R82_02135) yczM 419717..419806 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  AB0R82_RS02140 (AB0R82_02140) yczN 419888..420001 (-) 114 WP_003234495.1 YjcZ family sporulation protein -
  AB0R82_RS02145 (AB0R82_02145) thrD 420154..421518 (-) 1365 WP_198878978.1 aspartate kinase -
  AB0R82_RS02150 (AB0R82_02150) ceuB 421903..422853 (+) 951 WP_088325307.1 petrobactin ABC transporter permease YclN Machinery gene
  AB0R82_RS02155 (AB0R82_02155) yclO 422846..423793 (+) 948 WP_003246705.1 petrobactin ABC transporter permease YclO -
  AB0R82_RS02160 (AB0R82_02160) yclP 423787..424545 (+) 759 WP_003234487.1 petrobactin ABC transporter ATP-binding protein YclP -
  AB0R82_RS02165 (AB0R82_02165) yclQ 424567..425520 (+) 954 WP_038428358.1 petrobactin ABC transporter substrate-binding protein YclQ -
  AB0R82_RS02170 (AB0R82_02170) cdaE 425567..426985 (-) 1419 WP_003234482.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34885.30 Da        Isoelectric Point: 9.9364

>NTDB_id=1019666 AB0R82_RS02150 WP_088325307.1 421903..422853(+) (ceuB) [Bacillus subtilis strain JM553]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIIIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=1019666 AB0R82_RS02150 WP_088325307.1 421903..422853(+) (ceuB) [Bacillus subtilis strain JM553]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTATCA
TCGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAATAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTAGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTTGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTATAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCTCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCAGTTTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

100

0.525

Multiple sequence alignment