Detailed information NTG1019664

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: AB0R82_RS02125
• Genome accession: NZ_CP160220
• Coordinates: 418363..419511 (+)
• Length: 382 a.a.
• NCBI ID: WP_366592180.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain JM553
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 413363..424511

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB0R82_RS02105 (AB0R82_02105)	yclH	413740..414420 (-)	681	WP_186453404.1	ABC transporter ATP-binding protein	-
AB0R82_RS02110 (AB0R82_02110)	yclI	414436..415896 (-)	1461	WP_198878975.1	ABC transporter permease	-
AB0R82_RS02115 (AB0R82_02115)	yclJ	416108..416791 (+)	684	WP_204551422.1	response regulator transcription factor	-
AB0R82_RS02120 (AB0R82_02120)	yclK	416778..418199 (+)	1422	WP_086343454.1	two-component system sensor histidine kinase YclK	-
AB0R82_RS02125 (AB0R82_02125)	rapC	418363..419511 (+)	1149	WP_366592180.1	response regulator aspartate phosphatase RapC	Regulator
AB0R82_RS02130 (AB0R82_02130)	phrC	419495..419617 (+)	123	WP_198878977.1	phosphatase RapC inhibitor PhrC	Regulator
AB0R82_RS02135 (AB0R82_02135)	yczM	419717..419806 (-)	90	WP_015482794.1	YjcZ family sporulation protein	-
AB0R82_RS02140 (AB0R82_02140)	yczN	419888..420001 (-)	114	WP_003234495.1	YjcZ family sporulation protein	-
AB0R82_RS02145 (AB0R82_02145)	thrD	420154..421518 (-)	1365	WP_198878978.1	aspartate kinase	-
AB0R82_RS02150 (AB0R82_02150)	ceuB	421903..422853 (+)	951	WP_088325307.1	petrobactin ABC transporter permease YclN	Machinery gene
AB0R82_RS02155 (AB0R82_02155)	yclO	422846..423793 (+)	948	WP_003246705.1	petrobactin ABC transporter permease YclO	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45619.63 Da
• Isoelectric Point: 5.0364

>NTDB_id=1019664 AB0R82_RS02125 WP_366592180.1 418363..419511(+) (rapC) [Bacillus subtilis strain JM553]
MKSGVIPSSAVGQKINEWYRYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEAYYYMKQTYF
SLINIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALNMAQAEQKAQLVGRAYYNLGLCYYNQDLLG
PAIDYFEKAVSTFESSRIVNSLPQAYFLITLIYYKQGKHDKASEYHRRGYEYAKETDDADYAVKFEFLQSLYQDQPNEEG
IERCFQYLKNKNMYADIEDLALEVAKYYYEQKWFKLSASYFLQVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=1019664 AB0R82_RS02125 WP_366592180.1 418363..419511(+) (rapC) [Bacillus subtilis strain JM553]
ATGAAGAGCGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAGATATATCCGGACATTCAGCGT
GCCGGATGCCGAAGTGTTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGCAGCATGATTCCAACTTGCTGCTTTATT
ATTCACTAATGGAATTCCGGCACCAGCTTATGCTGGATTATCTTGAGCCGTTAGAGAAATTAAATATCGAAGACCAGCCA
AGCCTGTCTGAATTATCAAGAAACATTGACAGCAATCAGGCAGATCTCAAAGGGCTGCTCGACTATTACGTGAATTTTTT
TCGCGGGATGTATGAGTTTGATAAGCGGGAATTTATTTCTGCCATTACATACTATAAACAGGCGGAGAAAAAGCTCTCCT
TTGTCGCAGACCATATTGAACGGGCTGAATTCTATTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTATTTT
TCATTGATTAATATAAAAAACGCCTATGAAATTTACGTGGAGCAGGAAACCTATAATGTGAGAATCATTCAGTGCCATTT
CGTGTTCGGGGTCAACCTGATGGATGAAAGAAATTTCGAACAAGCCGCACGCCATTTCAAATTGGCGCTCAATATGGCCC
AAGCGGAACAAAAAGCCCAGCTGGTCGGAAGAGCATACTACAATCTCGGATTATGCTATTACAATCAAGACCTTCTAGGC
CCTGCCATTGATTACTTTGAAAAAGCGGTCTCCACGTTTGAAAGCAGCAGGATCGTCAATTCTCTCCCGCAAGCCTATTT
TTTAATCACCCTGATTTATTATAAACAGGGAAAACATGATAAAGCTTCGGAATATCACAGGCGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGACTATGCCGTAAAATTCGAGTTTTTGCAATCCCTATATCAGGATCAGCCCAATGAAGAAGGA
ATCGAACGATGTTTCCAATACTTAAAAAATAAAAATATGTACGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
TTACTATGAACAGAAATGGTTTAAACTGTCTGCTTCCTACTTTCTACAAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

• Tetratricopeptide repeat (TPR_12) (223-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	99.215	100	0.992
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568