Detailed information NTG1019326

Bioinformatically predicted

Overview

• Name: comEA
• Type: Machinery gene
• Locus tag: AB0R81_RS12470
• Genome accession: NZ_CP160215
• Coordinates: 2569317..2569931 (-)
• Length: 204 a.a.
• NCBI ID: WP_015240245.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain JJ213
• Function: dsDNA binding to the cell surface (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2564317..2574931

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB0R81_RS12440 (AB0R81_12440)	rpsT	2564620..2564886 (+)	267	WP_003152876.1	30S ribosomal protein S20	-
AB0R81_RS12445 (AB0R81_12445)	holA	2564903..2565944 (-)	1042	Protein_2404	DNA polymerase III subunit delta	-
AB0R81_RS12450 (AB0R81_12450)	-	2565984..2566135 (-)	152	Protein_2405	hypothetical protein	-
AB0R81_RS12455 (AB0R81_12455)	-	2566176..2566310 (+)	135	WP_003152870.1	YqzM family protein	-
AB0R81_RS12460 (AB0R81_12460)	comEC	2566329..2568680 (-)	2352	WP_015240244.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
AB0R81_RS12465 (AB0R81_12465)	-	2568681..2569250 (-)	570	WP_003152868.1	ComE operon protein 2	-
AB0R81_RS12470 (AB0R81_12470)	comEA	2569317..2569931 (-)	615	WP_015240245.1	helix-hairpin-helix domain-containing protein	Machinery gene
AB0R81_RS12475 (AB0R81_12475)	comER	2569990..2570811 (+)	822	WP_015240246.1	late competence protein ComER	-
AB0R81_RS12480 (AB0R81_12480)	-	2570880..2571617 (-)	738	WP_015240247.1	class I SAM-dependent methyltransferase	-
AB0R81_RS12485 (AB0R81_12485)	rsfS	2571614..2571970 (-)	357	WP_007408260.1	ribosome silencing factor	-
AB0R81_RS12490 (AB0R81_12490)	yqeK	2571988..2572548 (-)	561	WP_014418422.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
AB0R81_RS12495 (AB0R81_12495)	-	2572538..2573107 (-)	570	WP_366572821.1	nicotinate-nucleotide adenylyltransferase	-
AB0R81_RS12500 (AB0R81_12500)	yhbY	2573118..2573408 (-)	291	WP_007408257.1	ribosome assembly RNA-binding protein YhbY	-
AB0R81_RS12505 (AB0R81_12505)	aroE	2573402..2574244 (-)	843	WP_015240248.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 204 a.a.
• Molecular weight: 22209.32 Da
• Isoelectric Point: 5.5211

>NTDB_id=1019326 AB0R81_RS12470 WP_015240245.1 2569317..2569931(-) (comEA) [Bacillus velezensis strain JJ213]
MTKAMMTERLRRNLKILGACLAAGAVFICIWLFRSEKEEPVKQQSVLGQTASASVADKKDTADDKIMIDVKGAVRNPGVY
EMKAGDRVTQAIEKAGGLKKKADELNVNLAEQLQDGTIVYIPSEGEEENRPKTAAGEKENAAVNINTASLDELQAISGVG
QKKAEAIIAYREENGRFQTAEDLMNVSGFGEKSFERIKTSITVK

Nucleotide

• Length: 615 bp

>NTDB_id=1019326 AB0R81_RS12470 WP_015240245.1 2569317..2569931(-) (comEA) [Bacillus velezensis strain JJ213]
ATGACGAAAGCGATGATGACGGAGCGGCTGCGGCGGAACCTGAAAATTCTGGGCGCTTGTCTTGCGGCAGGGGCGGTTTT
TATCTGTATTTGGCTGTTTCGTTCTGAAAAGGAAGAGCCGGTCAAACAGCAGTCTGTGCTCGGCCAAACAGCCTCAGCAT
CCGTCGCGGACAAAAAAGACACAGCAGACGATAAGATTATGATTGATGTGAAAGGTGCGGTCCGGAATCCCGGCGTGTAT
GAAATGAAAGCGGGAGACAGAGTGACGCAAGCCATTGAAAAAGCCGGCGGCCTGAAGAAAAAGGCGGATGAATTGAATGT
TAATTTAGCAGAGCAGCTGCAGGACGGCACGATTGTTTATATTCCGAGTGAAGGCGAAGAGGAGAATCGCCCGAAAACAG
CGGCGGGTGAAAAGGAGAATGCAGCTGTCAATATCAATACGGCATCTCTGGACGAACTTCAGGCAATTTCCGGGGTGGGG
CAGAAAAAAGCGGAAGCGATTATCGCCTACCGAGAAGAAAACGGACGGTTTCAGACTGCTGAAGATTTGATGAATGTATC
AGGCTTTGGAGAGAAGTCATTTGAGCGGATAAAAACTTCCATTACGGTAAAGTGA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix motif (HHH_3) (141-202)

• SLBB domain (SLBB) (68-122)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEA	Bacillus subtilis subsp. subtilis str. 168	58.854	94.118	0.554
comEA/celA/cilE	Streptococcus pneumoniae TIGR4	35.545	100	0.368
comEA/celA/cilE	Streptococcus mitis SK321	35.071	100	0.363