Detailed information NTG1019193

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: AB0R80_RS17850
• Genome accession: NZ_CP160213
• Coordinates: 3603850..3605013 (-)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus velezensis strain JM199
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3598850..3610013

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB0R80_RS17820 (AB0R80_17820)	-	3599116..3599535 (-)	420	WP_025285352.1	TIGR03826 family flagellar region protein	-
AB0R80_RS17825 (AB0R80_17825)	comFC	3599609..3600298 (-)	690	WP_327934932.1	phosphoribosyltransferase family protein	Machinery gene
AB0R80_RS17830 (AB0R80_17830)	-	3600304..3600588 (-)	285	WP_003151389.1	competence protein ComFB	-
AB0R80_RS17835 (AB0R80_17835)	comFA	3600646..3602031 (-)	1386	WP_327934846.1	DEAD/DEAH box helicase	Machinery gene
AB0R80_RS17840 (AB0R80_17840)	-	3602138..3602986 (-)	849	WP_327934847.1	DegV family protein	-
AB0R80_RS17845 (AB0R80_17845)	degU	3603084..3603773 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
AB0R80_RS17850 (AB0R80_17850)	degS	3603850..3605013 (-)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
AB0R80_RS17855 (AB0R80_17855)	-	3605236..3605883 (+)	648	WP_003151384.1	YigZ family protein	-
AB0R80_RS17860 (AB0R80_17860)	-	3605888..3607102 (+)	1215	WP_015418337.1	LCP family protein	-
AB0R80_RS17865 (AB0R80_17865)	-	3607192..3608268 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
AB0R80_RS17870 (AB0R80_17870)	-	3608401..3609597 (-)	1197	WP_327934848.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=1019193 AB0R80_RS17850 WP_007407484.1 3603850..3605013(-) (degS) [Bacillus velezensis strain JM199]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=1019193 AB0R80_RS17850 WP_007407484.1 3603850..3605013(-) (degS) [Bacillus velezensis strain JM199]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGTAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TCTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATTATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTGCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951