Detailed information NTG1019041

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: AB0R79_RS18575
• Genome accession: NZ_CP160211
• Coordinates: 3684554..3685717 (-)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus velezensis strain JM236
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3679554..3690717

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB0R79_RS18545 (AB0R79_18545)	-	3679818..3680237 (-)	420	WP_012118571.1	TIGR03826 family flagellar region protein	-
AB0R79_RS18550 (AB0R79_18550)	comFC	3680311..3681000 (-)	690	WP_197061611.1	phosphoribosyltransferase family protein	Machinery gene
AB0R79_RS18555 (AB0R79_18555)	-	3681006..3681290 (-)	285	WP_007407481.1	competence protein ComFB	-
AB0R79_RS18560 (AB0R79_18560)	comFA	3681348..3682733 (-)	1386	WP_167340893.1	DEAD/DEAH box helicase	Machinery gene
AB0R79_RS18565 (AB0R79_18565)	-	3682842..3683690 (-)	849	WP_044801920.1	DegV family protein	-
AB0R79_RS18570 (AB0R79_18570)	degU	3683788..3684477 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
AB0R79_RS18575 (AB0R79_18575)	degS	3684554..3685717 (-)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
AB0R79_RS18580 (AB0R79_18580)	-	3685940..3686587 (+)	648	WP_007614107.1	YigZ family protein	-
AB0R79_RS18585 (AB0R79_18585)	-	3686592..3687812 (+)	1221	WP_105937243.1	LCP family protein	-
AB0R79_RS18590 (AB0R79_18590)	-	3687911..3688987 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
AB0R79_RS18595 (AB0R79_18595)	-	3689120..3690316 (-)	1197	WP_167340894.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=1019041 AB0R79_RS18575 WP_007407484.1 3684554..3685717(-) (degS) [Bacillus velezensis strain JM236]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=1019041 AB0R79_RS18575 WP_007407484.1 3684554..3685717(-) (degS) [Bacillus velezensis strain JM236]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTAGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTACGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGCATCGGAGACACAGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAATGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951