Detailed information NTG1019024

Bioinformatically predicted

Overview

• Name: comEA
• Type: Machinery gene
• Locus tag: AB0R79_RS13480
• Genome accession: NZ_CP160211
• Coordinates: 2729857..2730471 (-)
• Length: 204 a.a.
• NCBI ID: WP_015240245.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain JM236
• Function: dsDNA binding to the cell surface (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2724857..2735471

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB0R79_RS13450 (AB0R79_13450)	rpsT	2725160..2725426 (+)	267	WP_003152876.1	30S ribosomal protein S20	-
AB0R79_RS13455 (AB0R79_13455)	holA	2725443..2726484 (-)	1042	Protein_2606	DNA polymerase III subunit delta	-
AB0R79_RS13460 (AB0R79_13460)	-	2726524..2726675 (-)	152	Protein_2607	hypothetical protein	-
AB0R79_RS13465 (AB0R79_13465)	-	2726716..2726850 (+)	135	WP_003152870.1	YqzM family protein	-
AB0R79_RS13470 (AB0R79_13470)	comEC	2726869..2729220 (-)	2352	WP_167340757.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
AB0R79_RS13475 (AB0R79_13475)	-	2729221..2729790 (-)	570	WP_003152868.1	ComE operon protein 2	-
AB0R79_RS13480 (AB0R79_13480)	comEA	2729857..2730471 (-)	615	WP_015240245.1	helix-hairpin-helix domain-containing protein	Machinery gene
AB0R79_RS13485 (AB0R79_13485)	comER	2730530..2731351 (+)	822	WP_015240246.1	late competence protein ComER	-
AB0R79_RS13490 (AB0R79_13490)	-	2731420..2732157 (-)	738	WP_015240247.1	class I SAM-dependent methyltransferase	-
AB0R79_RS13495 (AB0R79_13495)	rsfS	2732154..2732510 (-)	357	WP_007408260.1	ribosome silencing factor	-
AB0R79_RS13500 (AB0R79_13500)	yqeK	2732528..2733088 (-)	561	WP_014418422.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
AB0R79_RS13505 (AB0R79_13505)	-	2733078..2733647 (-)	570	WP_007408258.1	nicotinate-nucleotide adenylyltransferase	-
AB0R79_RS13510 (AB0R79_13510)	yhbY	2733658..2733948 (-)	291	WP_007408257.1	ribosome assembly RNA-binding protein YhbY	-
AB0R79_RS13515 (AB0R79_13515)	aroE	2733942..2734784 (-)	843	WP_015240248.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 204 a.a.
• Molecular weight: 22209.32 Da
• Isoelectric Point: 5.5211

>NTDB_id=1019024 AB0R79_RS13480 WP_015240245.1 2729857..2730471(-) (comEA) [Bacillus velezensis strain JM236]
MTKAMMTERLRRNLKILGACLAAGAVFICIWLFRSEKEEPVKQQSVLGQTASASVADKKDTADDKIMIDVKGAVRNPGVY
EMKAGDRVTQAIEKAGGLKKKADELNVNLAEQLQDGTIVYIPSEGEEENRPKTAAGEKENAAVNINTASLDELQAISGVG
QKKAEAIIAYREENGRFQTAEDLMNVSGFGEKSFERIKTSITVK

Nucleotide

• Length: 615 bp

>NTDB_id=1019024 AB0R79_RS13480 WP_015240245.1 2729857..2730471(-) (comEA) [Bacillus velezensis strain JM236]
ATGACGAAAGCGATGATGACGGAGCGGCTGCGGCGGAACCTGAAAATTCTGGGCGCTTGTCTTGCGGCAGGGGCGGTTTT
TATCTGTATTTGGCTGTTTCGTTCTGAAAAGGAAGAGCCGGTCAAACAGCAGTCTGTGCTCGGCCAAACAGCCTCAGCAT
CCGTCGCGGACAAAAAAGACACAGCAGACGATAAGATTATGATTGATGTGAAAGGTGCGGTCCGGAATCCCGGCGTGTAT
GAAATGAAAGCGGGAGACAGAGTGACGCAAGCCATTGAAAAAGCCGGCGGCCTGAAGAAAAAGGCGGATGAATTGAATGT
TAATTTAGCAGAGCAGCTGCAGGACGGCACGATTGTTTATATTCCGAGTGAAGGCGAAGAGGAGAATCGCCCGAAAACAG
CGGCGGGTGAAAAGGAGAATGCAGCTGTCAATATCAATACGGCATCTCTGGACGAACTTCAGGCAATTTCCGGGGTGGGG
CAGAAAAAAGCGGAAGCGATTATCGCCTACCGAGAAGAAAACGGACGGTTTCAGACTGCTGAAGATTTGATGAATGTATC
AGGCTTTGGAGAGAAGTCATTTGAGCGGATAAAAACTTCCATTACGGTAAAGTGA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix motif (HHH_3) (141-202)

• SLBB domain (SLBB) (68-122)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEA	Bacillus subtilis subsp. subtilis str. 168	58.854	94.118	0.554
comEA/celA/cilE	Streptococcus pneumoniae TIGR4	35.545	100	0.368
comEA/celA/cilE	Streptococcus mitis SK321	35.071	100	0.363