Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   AB0R79_RS07210 Genome accession   NZ_CP160211
Coordinates   1387271..1387735 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain JM236     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1382271..1392735
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB0R79_RS07190 (AB0R79_07190) - 1382752..1384572 (+) 1821 WP_167340634.1 PAS domain-containing protein -
  AB0R79_RS07195 (AB0R79_07195) - 1384597..1385766 (-) 1170 WP_015417364.1 aminotransferase A -
  AB0R79_RS07200 (AB0R79_07200) - 1385967..1386128 (-) 162 WP_007409608.1 hypothetical protein -
  AB0R79_RS07205 (AB0R79_07205) cheV 1386317..1387228 (+) 912 WP_167340635.1 chemotaxis protein CheV -
  AB0R79_RS07210 (AB0R79_07210) kre 1387271..1387735 (-) 465 WP_003154622.1 YkyB family protein Regulator
  AB0R79_RS07215 (AB0R79_07215) - 1387858..1389150 (-) 1293 WP_015239757.1 MFS transporter -
  AB0R79_RS07220 (AB0R79_07220) - 1389226..1389720 (-) 495 WP_088462390.1 L,D-transpeptidase family protein -
  AB0R79_RS07225 (AB0R79_07225) - 1389795..1390658 (-) 864 WP_015239758.1 metallophosphoesterase -
  AB0R79_RS07230 (AB0R79_07230) fadH 1390803..1391567 (+) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  AB0R79_RS07235 (AB0R79_07235) - 1391732..1392227 (+) 496 Protein_1366 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=1019003 AB0R79_RS07210 WP_003154622.1 1387271..1387735(-) (kre) [Bacillus velezensis strain JM236]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=1019003 AB0R79_RS07210 WP_003154622.1 1387271..1387735(-) (kre) [Bacillus velezensis strain JM236]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAGTCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929

Multiple sequence alignment