Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | AB0E22_RS08740 | Genome accession | NZ_CP160191 |
| Coordinates | 1773211..1773717 (-) | Length | 168 a.a. |
| NCBI ID | WP_014614920.1 | Uniprot ID | A0A161W350 |
| Organism | Staphylococcus pseudintermedius strain 39-045 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1768211..1778717
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB0E22_RS08720 (AB0E22_08720) | - | 1769455..1771446 (+) | 1992 | WP_369016904.1 | catalase | - |
| AB0E22_RS08725 (AB0E22_08725) | - | 1771660..1772421 (-) | 762 | WP_306419666.1 | Abi family protein | - |
| AB0E22_RS08730 (AB0E22_08730) | - | 1772482..1772724 (-) | 243 | WP_020220245.1 | hypothetical protein | - |
| AB0E22_RS08735 (AB0E22_08735) | rpsR | 1772915..1773157 (-) | 243 | WP_014614919.1 | 30S ribosomal protein S18 | - |
| AB0E22_RS08740 (AB0E22_08740) | ssbA | 1773211..1773717 (-) | 507 | WP_014614920.1 | single-stranded DNA-binding protein | Machinery gene |
| AB0E22_RS08745 (AB0E22_08745) | rpsF | 1773740..1774036 (-) | 297 | WP_014614921.1 | 30S ribosomal protein S6 | - |
| AB0E22_RS08750 (AB0E22_08750) | sbi | 1774373..1775869 (+) | 1497 | WP_065520724.1 | Ig-binding surface protein Sbi/SpsK | - |
| AB0E22_RS08755 (AB0E22_08755) | - | 1775923..1776732 (-) | 810 | WP_140241061.1 | ABC transporter permease subunit | - |
| AB0E22_RS08760 (AB0E22_08760) | - | 1776725..1777660 (-) | 936 | WP_140241062.1 | ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 168 a.a. Molecular weight: 18738.42 Da Isoelectric Point: 5.1957
>NTDB_id=1018786 AB0E22_RS08740 WP_014614920.1 1773211..1773717(-) (ssbA) [Staphylococcus pseudintermedius strain 39-045]
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRKQAENVNNFLFKGSLAGVDGRLQSR
SYENQEGRRVFVTEVVCDSVQFLEPKSQNQRHANQNQGNQFDSYGQGFGGQQQGQNSSYQNNHQQPANDNPFANANGPID
ISDDDLPF
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRKQAENVNNFLFKGSLAGVDGRLQSR
SYENQEGRRVFVTEVVCDSVQFLEPKSQNQRHANQNQGNQFDSYGQGFGGQQQGQNSSYQNNHQQPANDNPFANANGPID
ISDDDLPF
Nucleotide
Download Length: 507 bp
>NTDB_id=1018786 AB0E22_RS08740 WP_014614920.1 1773211..1773717(-) (ssbA) [Staphylococcus pseudintermedius strain 39-045]
ATGCTTAATAGAGTCGTATTAGTAGGTCGCTTAACTAAAGATCCAGAATACAGAACGACACCCTCAGGCGTAAGTGTAGC
GACATTTACCTTAGCGGTTAATCGTACATTTACGAATGCGCAAGGGGAACGTGAAGCAGACTTCATTAACTGCGTTGTTT
TCCGTAAACAAGCAGAAAATGTAAACAACTTTTTGTTTAAAGGAAGTCTCGCTGGCGTTGACGGTCGCTTACAATCACGC
AGTTACGAAAACCAAGAAGGCCGACGTGTATTCGTCACTGAAGTGGTATGTGATAGTGTTCAATTCCTTGAGCCAAAATC
ACAAAACCAACGTCACGCGAATCAAAACCAAGGCAATCAATTCGATAGCTACGGTCAAGGATTCGGTGGACAACAACAAG
GCCAAAATTCGTCTTATCAAAACAATCATCAGCAACCAGCTAACGATAATCCATTTGCGAATGCGAACGGTCCTATCGAT
ATTAGCGATGATGATTTACCATTCTAA
ATGCTTAATAGAGTCGTATTAGTAGGTCGCTTAACTAAAGATCCAGAATACAGAACGACACCCTCAGGCGTAAGTGTAGC
GACATTTACCTTAGCGGTTAATCGTACATTTACGAATGCGCAAGGGGAACGTGAAGCAGACTTCATTAACTGCGTTGTTT
TCCGTAAACAAGCAGAAAATGTAAACAACTTTTTGTTTAAAGGAAGTCTCGCTGGCGTTGACGGTCGCTTACAATCACGC
AGTTACGAAAACCAAGAAGGCCGACGTGTATTCGTCACTGAAGTGGTATGTGATAGTGTTCAATTCCTTGAGCCAAAATC
ACAAAACCAACGTCACGCGAATCAAAACCAAGGCAATCAATTCGATAGCTACGGTCAAGGATTCGGTGGACAACAACAAG
GCCAAAATTCGTCTTATCAAAACAATCATCAGCAACCAGCTAACGATAATCCATTTGCGAATGCGAACGGTCCTATCGAT
ATTAGCGATGATGATTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
64.773 |
100 |
0.679 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
56.14 |
100 |
0.571 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
58.182 |
65.476 |
0.381 |