Detailed information    

insolico Bioinformatically predicted

Overview

Name   brsR   Type   Regulator
Locus tag   DQL34_RS00400 Genome accession   NZ_LS483339
Coordinates   66593..67030 (-) Length   145 a.a.
NCBI ID   WP_111679081.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain NCTC12958     
Function   antagonizing the proteolysis of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 61593..72030
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL34_RS00370 (NCTC12958_00079) - 61610..62299 (+) 690 WP_197709066.1 DUF3800 domain-containing protein -
  DQL34_RS00380 (NCTC12958_00080) argR 62769..63197 (+) 429 WP_024704313.1 arginine repressor -
  DQL34_RS00385 (NCTC12958_00081) - 63197..63556 (+) 360 WP_064355739.1 YlbF family regulator -
  DQL34_RS00390 (NCTC12958_00082) hexA 63549..66107 (+) 2559 WP_111679079.1 DNA mismatch repair protein MutS Machinery gene
  DQL34_RS00395 (NCTC12958_00083) - 66141..66596 (-) 456 WP_084825708.1 DUF3021 domain-containing protein -
  DQL34_RS00400 (NCTC12958_00084) brsR 66593..67030 (-) 438 WP_111679081.1 LytTR family DNA-binding domain-containing protein Regulator
  DQL34_RS00405 (NCTC12958_00085) - 67209..67514 (+) 306 WP_084830425.1 hypothetical protein -
  DQL34_RS00410 (NCTC12958_00086) hexB 67566..69509 (+) 1944 WP_011680601.1 DNA mismatch repair endonuclease MutL Machinery gene
  DQL34_RS00415 (NCTC12958_00087) - 69640..69861 (+) 222 WP_011680602.1 hypothetical protein -
  DQL34_RS00420 (NCTC12958_00088) ruvA 70013..70603 (+) 591 WP_111679083.1 Holliday junction branch migration protein RuvA Machinery gene
  DQL34_RS00425 (NCTC12958_00089) - 70610..71164 (+) 555 WP_111679085.1 DNA-3-methyladenine glycosylase I -

Sequence

Protein


Download         Length: 145 a.a.        Molecular weight: 16946.61 Da        Isoelectric Point: 9.2026

>NTDB_id=1018520 DQL34_RS00400 WP_111679081.1 66593..67030(-) (brsR) [Streptococcus thermophilus strain NCTC12958]
MKIKVQIDSVFQEEMLQIQAPSRTPKIQQVVEFVESLDDNQRLKGKKDGETYLIEPNAISRIYIENRQVLAETILGEYHL
GLRLYQVLEKLPSYFIKISQSEIVNLKEIERFNITPNGLVEIHLKNKETTYSSRRSLKAIKEKLQ

Nucleotide


Download         Length: 438 bp        

>NTDB_id=1018520 DQL34_RS00400 WP_111679081.1 66593..67030(-) (brsR) [Streptococcus thermophilus strain NCTC12958]
ATGAAAATAAAAGTTCAGATTGACTCGGTATTCCAAGAAGAAATGTTGCAGATTCAGGCACCTAGTCGGACGCCCAAGAT
TCAGCAAGTGGTCGAGTTTGTCGAATCTTTGGATGATAACCAACGACTCAAAGGAAAAAAAGATGGCGAAACTTATCTCA
TCGAGCCTAATGCTATTTCCAGAATTTACATCGAAAATCGCCAAGTTTTAGCTGAAACTATTCTAGGAGAGTACCACTTA
GGCTTACGTCTCTATCAAGTTTTAGAAAAACTGCCATCTTACTTTATCAAAATCTCACAATCAGAGATTGTCAACCTCAA
AGAAATTGAACGCTTCAACATTACCCCTAACGGCCTCGTTGAAATTCACCTTAAAAACAAGGAAACCACCTACTCATCAC
GCCGTTCCCTCAAAGCAATAAAGGAGAAATTACAATGA

Domains

Predicted by InterProScan.

LytTr DNA-binding domain (LytTR)

(50-144)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  brsR Streptococcus mutans UA159

36.806

99.31

0.366