Detailed information NTG1017880

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: DQM36_RS04575
• Genome accession: NZ_LS483332
• Coordinates: 883986..885056 (-)
• Length: 356 a.a.
• NCBI ID: WP_038432344.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes strain NCTC12696
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 878986..890056

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQM36_RS04555 (NCTC12696_00893)	citX	879567..880145 (+)	579	WP_011054513.1	citrate lyase holo-[acyl-carrier protein] synthase	-
DQM36_RS04560 (NCTC12696_00894)	-	880160..881554 (+)	1395	WP_014635474.1	oxaloacetate decarboxylase subunit alpha	-
DQM36_RS04565 (NCTC12696_00895)	citC	881664..882716 (-)	1053	WP_002991776.1	[citrate (pro-3S)-lyase] ligase	-
DQM36_RS04570 (NCTC12696_00896)	-	882805..883287 (-)	483	WP_002984600.1	PASTA domain-containing protein	-
DQM36_RS04575 (NCTC12696_00897)	xerS	883986..885056 (-)	1071	WP_038432344.1	tyrosine recombinase XerS	Machinery gene
DQM36_RS04580 (NCTC12696_00898)	-	885527..886225 (+)	699	WP_038432346.1	XRE family transcriptional regulator	-
DQM36_RS04585 (NCTC12696_00899)	ffh	886360..887922 (-)	1563	WP_023610007.1	signal recognition particle protein	-
DQM36_RS04590 (NCTC12696_00900)	-	887937..888269 (-)	333	WP_002989745.1	putative DNA-binding protein	-
DQM36_RS04595 (NCTC12696_00901)	-	888367..889065 (-)	699	WP_002989743.1	GntR family transcriptional regulator	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41499.62 Da
• Isoelectric Point: 9.5552

>NTDB_id=1017880 DQM36_RS04575 WP_038432344.1 883986..885056(-) (xerS) [Streptococcus pyogenes strain NCTC12696]
MRRELLLEKIETYKAIMPWYVLDYYQSKLAVPYSFTTLYEYLKEYKRFFDWLMDADLTQVPKIADIDLSTLEHLTKKDLE
AFVLYLRERPSLNTYSTKEGLSQTTINRTLSALSSLYKYLTEEVENDQGEPYFYRNVMKKVSTKKKKETLASRAENIKQK
LFLGDETLAFLDYVDKEYEQKLSNRAKSSFRKNKERDLAIIALLLASGVRLSEAVNLDLKDVNLNMMIIEVIRKGGKRDS
VNVAGFAKGYLESYLAVRQRRYKAEKQDLAFFLTEYRGVPNRMDASSIEKMVGKYSEDFKIRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHSSTQVTDLYTHIVNDEQKNALDNL

Nucleotide

• Length: 1071 bp

>NTDB_id=1017880 DQM36_RS04575 WP_038432344.1 883986..885056(-) (xerS) [Streptococcus pyogenes strain NCTC12696]
ATGAGACGCGAATTATTACTAGAAAAAATTGAAACCTACAAGGCTATCATGCCTTGGTATGTTTTAGATTATTATCAATC
CAAATTAGCTGTTCCATACAGCTTTACCACCTTATATGAGTATTTAAAAGAATACAAACGCTTTTTTGATTGGCTGATGG
ATGCTGATTTAACGCAGGTGCCAAAGATTGCTGATATTGACTTGAGCACGCTTGAGCACCTTACCAAGAAGGATTTAGAG
GCCTTTGTGCTTTATTTGCGGGAACGACCTTCTCTCAACACCTATTCCACCAAAGAGGGGCTTTCTCAAACCACTATTAA
TCGGACCTTGTCTGCCTTATCAAGCCTTTACAAGTACTTGACTGAAGAGGTTGAAAATGACCAAGGGGAGCCTTATTTTT
ATCGGAATGTTATGAAAAAAGTGTCAACAAAAAAGAAAAAAGAAACCCTGGCTTCCAGAGCGGAAAATATTAAGCAGAAA
CTGTTTTTAGGTGATGAAACTCTAGCTTTCTTGGATTATGTGGATAAGGAATATGAGCAAAAATTGTCTAATCGTGCCAA
ATCTTCTTTCCGTAAAAATAAGGAGAGGGATTTGGCTATTATTGCTCTACTACTTGCTTCTGGTGTTCGTTTGTCTGAAG
CAGTGAATCTTGATTTAAAAGATGTCAATCTAAATATGATGATTATCGAAGTTATTCGCAAAGGCGGAAAACGTGATTCA
GTCAATGTAGCAGGTTTTGCGAAAGGTTATTTGGAGTCTTATTTAGCTGTTCGTCAGAGACGTTACAAGGCTGAAAAACA
GGATCTTGCTTTCTTTTTAACAGAATACCGTGGCGTTCCAAATCGAATGGATGCTTCTAGTATAGAAAAGATGGTTGGCA
AGTACTCTGAGGATTTTAAAATTCGTGTGACTCCTCACAAATTGCGTCATACGCTAGCGACAAGACTATATGATGCTACT
AAATCTCAGGTGTTAGTTAGTCATCAATTAGGCCATTCCTCTACTCAAGTCACGGATCTTTATACCCATATTGTCAATGA
TGAGCAAAAAAATGCTTTAGATAACCTTTAA

Domains

Predicted by InterProScan.

• Phage integrase family (Phage_integrase) (177-344)

• Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4) (33-122)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	80.337	100	0.803